Machine learning transition temperatures from 2D structure.

J Mol Graph Model

CCDC Army Research Laboratory, Aberdeen Proving Ground, MD, 21005, USA. Electronic address:

Published: June 2021

A priori knowledge of physicochemical properties such as melting and boiling could expedite materials discovery. However, theoretical modeling from first principles poses a challenge for efficient virtual screening of potential candidates. As an alternative, the tools of data science are becoming increasingly important for exploring chemical datasets and predicting material properties. Herein, we extend a molecular representation, or set of descriptors, first developed for quantitative structure-property relationship modeling by Yalkowsky and coworkers known as the Unified Physicochemical Property Estimation Relationships (UPPER). This molecular representation has group-constitutive and geometrical descriptors that map to enthalpy and entropy; two thermodynamic quantities that drive thermal phase transitions. We extend the UPPER representation to include additional information about sp-bonded fragments. Additionally, instead of using the UPPER descriptors in a series of thermodynamically-inspired calculations, as per Yalkowsky, we use the descriptors to construct a vector representation for use with machine learning techniques. The concise and easy-to-compute representation, combined with a gradient-boosting decision tree model, provides an appealing framework for predicting experimental transition temperatures in a diverse chemical space. An application to energetic materials shows that the method is predictive, despite a relatively modest energetics reference dataset. We also report competitive results on diverse public datasets of melting points (i.e., OCHEM, Enamine, Bradley, and Bergström) comprised of over 47k structures. Open source software is available at https://github.com/USArmyResearchLab/ARL-UPPER.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jmgm.2021.107848DOI Listing

Publication Analysis

Top Keywords

machine learning
8
transition temperatures
8
molecular representation
8
representation
5
learning transition
4
temperatures structure
4
structure priori
4
priori knowledge
4
knowledge physicochemical
4
physicochemical properties
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!