Some thoughts on counts in sequencing studies.

NAR Genom Bioinform

Department of Computer Sciences, Applied Mathematics and Statistics,  Universitat de Girona, Campus Montilivi, 17003 Girona, Spain.

Published: December 2020

Measurements in sequencing studies are mostly based on counts. There is a lack of theoretical developments for the analysis and modelling of this type of data. Some thoughts in this direction are presented, which might serve as a seed. The main issues addressed are the compositional character of multinomial probabilities and the corresponding representation in orthogonal (isometric) coordinates, and modelling distributions for sequencing data taking into account possible effects of amplification techniques.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7679068PMC
http://dx.doi.org/10.1093/nargab/lqaa094DOI Listing

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