Aryl diazonium ions have long been used in bioconjugation due to their reactivity toward electron-rich aryl residues, such as tyrosine. However, their utility in biological systems has been restricted due to the requirement of harsh conditions for their generation , as well as limited hydrolytic stability. Previous work describing a scaffold known as triazabutadiene (TBD) has shown the ability to protect aryl diazonium ions allowing for increased synthetic utility, as well as triggered release under biologically relevant conditions. Herein, we describe the synthesis and application of a novel TBD, capable of installation of a cyclooctyne on protein surfaces for later use of copper-free click reactions involving functional azides. The probe shows efficient protein labeling across a wide pH range that can be accomplished in a convenient and timely manner. Orthogonality of the cyclooctyne modification was showcased by labeling a model protein in the presence of hen egg proteins, using an azide-containing fluorophore. We further confirmed that the azobenzene modification can be cleaved using sodium dithionite treatment.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7895501PMC
http://dx.doi.org/10.1021/acs.bioconjchem.0c00677DOI Listing

Publication Analysis

Top Keywords

copper-free click
8
aryl diazonium
8
diazonium ions
8
click enabled
4
enabled triazabutadiene
4
triazabutadiene bioorthogonal
4
protein
4
bioorthogonal protein
4
protein functionalization
4
functionalization aryl
4

Similar Publications

In this study, we applied a systematic approach to establish an iterative workflow and to drive the chemical design of thermosensitive, in situ forming injectables as a function of the intended target product profile. Self-assembly, mechanical properties, physical state, and thermal transition behavior were assessed via nuclear magnetic resonance, oscillatory rheology, turbidimetry and visual inspection techniques. Thus, poly(N-isopropylacrylamide) (PNIPAM) and poly(2-alkyl-2-oxazoline)s (PAOx)s with LCSTs below body temperature were studied before and after grafting them onto azido-substituted hyaluronic acid (HA) via strain-promoted azide-alkyne cycloaddition (SPAAC).

View Article and Find Full Text PDF

Synthesis and Characterization of α,ω-End Orthogonally Functionalizable Glycopolymers from Native Glycans.

Polym Chem

May 2024

Department of Chemistry, Chemical and Biomedical Engineering and Center for Gene Regulation in Health and Disease (GRHD), Cleveland State University, 2121 Euclid Avenue, Cleveland, Ohio 44115, United States.

Glycopolymers have been employed as biomimetic glycoconjugates in both biological and biomedical research and applications. Among them, chain-end functionalized glycopolymers are very often explored for protein modification, microarray, biosensor, bioprobe and other applications. Herein, we report a straightforward synthesis of α,ω-end orthogonally functionalizable glycopolymers.

View Article and Find Full Text PDF
Article Synopsis
  • Methods in chemical biology, specifically genetic code expansion (GCE), have greatly improved the study of integral membrane proteins by allowing the incorporation of noncanonical amino acids (ncAAs).
  • GCE is particularly challenging for membrane proteins due to their unique characteristics and low expression levels, requiring effective use of mammalian cell cultures for functional expression.
  • Recent advancements include engineered AARS/tRNA pairs for better performance in mammalian cells, bioorthogonal reactions for attaching probes to live cell membrane proteins, and an expanded selection of ncAAs for in-depth analysis of protein structure and dynamics.
View Article and Find Full Text PDF

eSOMA-DM1, a Maytansinoid-Based Theranostic Small-Molecule Drug Conjugate for Neuroendocrine Tumors.

Bioconjug Chem

November 2024

Department of Radiology and Nuclear Medicine, Erasmus MC, University Medical Center Rotterdam, Rotterdam 3015 GD, the Netherlands.

Article Synopsis
  • Conventional chemotherapy is limited by its non-selective nature, leading to severe side effects, but small-molecule drug conjugates (SMDCs) offer a more targeted delivery to tumors.
  • The study introduces eSOMA-DM1, a new SMDC designed to target somatostatin receptor subtype 2 (SSTR2) and combines a cytotoxic agent with a chelate for improved monitoring and combination therapy.
  • In experiments, eSOMA-DM1 showed promising tumor uptake in animal models, outperforming the traditional DOTA-TATE compound, while also demonstrating prolonged circulation in the bloodstream.
View Article and Find Full Text PDF

Controlling the self-assembly of cellulose nanocrystals (CNCs) requires precise control over their surface chemistry for the directed assembly of advanced nanocomposites with tailored mechanical, thermal, and optical properties. In this work, in contrast to traditional chemistries, we conducted highly selective click-chemistry functionalization of cellulose nanocrystals with complementary DNA strands via a three-step hybridization-guided process. By grafting terminally functionalized oligonucleotides through copper-free click chemistry, we successfully facilitated the assembly of brushlike DNA-modified CNCs into bundled nanostructures with distinct chiral optical dichroism in thin films.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!