The complete chloroplast genome of (Poaceae) has been reconstructed from the whole-genome Illumina sequencing data. The complete chloroplast genome sequence of . obtained in this study was 139,640 bp in length, with a large single copy (LSC) region of 83,220 bp, a small single copy (SSC) region of 12,826 bp, separated by two inverted repeat (IR) regions of 21,797 bp each. The GC content was 38.9%, and in the LSC, SSC, and IR regions were 37.0%, 33.2%, and 44.2%, respectively. A total of 130 genes were annotated, including 83 protein-coding genes (PCGs), 39 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The result of the phylogenetic analysis showed that . was more closely related to the species of . .
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http://dx.doi.org/10.1080/23802359.2018.1473739 | DOI Listing |
Life (Basel)
January 2025
Technical Innovation Center for Utilization of Marine Biological Resources, Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361000, China.
, a marine benthic diatom, holds promise for human nutrition and health as well as for aquaculture applications. However, the scarcity of organelle genome data within the Navicula clade has impeded a comprehensive understanding and utilization of this group. Our research presents a pioneering exploration into the complete mitochondrial and chloroplast genome sequences of CACC 0356, shedding light on its phylogeny and evolutionary history.
View Article and Find Full Text PDFInt J Mol Sci
January 2025
College of Landscape Architecture and Horticulture Sciences, Southwest Research Center for Engineering Technology of Landscape Architecture (State Forestry and Grassland Administration), Yunnan Engineering Research Center for Functional Flower Resources and Industrialization, Research and Development Center of Landscape Plants and Horticulture Flowers, Southwest Forestry University, Kunming 650224, China.
is a genus of functional herbaceous plants in the Balsaminaceae, which are not only of great ornamental value and one of the world's top three flower bedding plants but also have a wide range of medicinal and edible uses. Currently, the taxonomy and phylogenetic relationships of species are still controversial. In order to better understand their chloroplast properties and phylogenetic evolution, nine plants (, , , , , , , , ) were sequenced, and their complete chloroplast genomes were analysed.
View Article and Find Full Text PDFGenes (Basel)
January 2025
College of Forestry, Guizhou University, Guiyang 550025, China.
: Section is the most diverse group in the genus L., and this group of plants has a long history of cultivation in China as popular ornamental flowers and oil plants. Sect.
View Article and Find Full Text PDFMol Phylogenet Evol
January 2025
Key Laboratory of Tree Breeding and Cultivation, National Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China. Electronic address:
Phylogenomic analyses have shown that reticulate evolution greatly affects the accuracy of phylogenetic inferences, and thus may challenge the authority of bifurcating phylogenetic trees. In this study, we re-evaluated the phylogenetic backbone of the genus Corylus based on complete taxon sampling and genomic data. We assembled 581 single-copy nuclear genes and whole plastomes from 64 genome resequencing datasets to elucidate the reticulate relationships within Corylus.
View Article and Find Full Text PDFCurr Issues Mol Biol
January 2025
Department of Plant Physiology, Genetics and Biotechnology, Faculty of Biology and Biotechnology, University of Warmia and Mazury, PL-10-719 Olsztyn, Poland.
ssp. (synonym ), a putative ancestor of the genus , has been classified within , although recent phylogenetic studies suggest that it represents a distinct species. This study reports the first complete chloroplast genome of , highlighting its structure, genetic composition, and phylogenetic relationships within and related Triticiceae species.
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