The complete chloroplast genome sequence of Korean and intra-species diversity.

Mitochondrial DNA B Resour

Department of Plant Science, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.

Published: August 2018

is a traditional medicinal plant well known for its anti-inflammatory effect. The complete chloroplast genome sequence of collected from Korea was obtained by assembly using whole genome sequence data. The chloroplast genome is 155,060 bp in length, containing 88,853 bp in a large single copy (LSC), 18,653 bp in a small single copy (SSC) and 23,777 bp in a pair of inverted repeats (IRs). A total of 112 genes including 78 protein-coding genes and 34 structural RNA genes were identified. The sequence comparison of two collected from Korea and China revealed 48 single nucleotide polymorphisms (SNPs) and 45 insertions/deletions (InDels). In addition, phylogenetic analysis represented intraspecific diversity within species collected in Korea and China.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800441PMC
http://dx.doi.org/10.1080/23802359.2018.1502637DOI Listing

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