Hand.-Mazz. (Ulmaceae) is an endangered species endemic to China. In this study, we reported its complete chloroplast (cp) genome based on Illumina pair-end sequencing. The whole genome was 158,999 bp long, consisting of a pair of inverted repeat (IR) regions of 26,427 bp, a large single copy (LSC) region of 87,397 bp and a small single copy (SSC) region of 18,748 bp. The cp genome contained 133 genes, including 88 protein-coding genes (80 PCG species), 37 tRNA genes (30 tRNA species), and eight rRNA genes (4 rRNA species). The overall G+C content of the whole genome was 35.6%, and the corresponding values of the LSC, SSC, and IR regions were 33.0, 28.3, and 42.4%, respectively. The maximum likelihood phylogenetic analysis of 25 selected chloroplast genomes demonstrated that . was closely related to and .
Download full-text PDF |
Source |
|---|---|
| http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800157 | PMC |
| http://dx.doi.org/10.1080/23802359.2018.1483762 | DOI Listing |
Publication Analysis
Top Keywords
Similar Publications
Characteristics and phylogenetic analysis of the complete chloroplast genome of Hance 1866 from the family Rosaceae.
Mitochondrial DNA B Resour
January 2025
Department of Chinese Materia Medica, Changchun Sci-Tech University, Changchun, PR China.
Hance is an important plant owing to its medicinal root and edible fruit, and extensively distributed in China. In this study, we reported the complete chloroplast genome of . The chloroplast genome was 156,335 bp in size with the overall GC content of 37.
View Article and Find Full Text PDFThe complete chloroplast genome sequence of Hook.f.1890 R.W.Bouman, 2022 (Phyllanthaceae).
Mitochondrial DNA B Resour
January 2025
College of Pharmacy, Dali University, Dali, China.
, a significant folk medicinal plant, is utilized to treat a variety of ailments. In this study, we reported the complete chloroplast genome sequence of this species. The length of the complete chloroplast genome was 155,810 bp, included a pair of inverted repeat (IR) regions (26,340 bp), a large single-copy region (LSC, 84,853 bp), and a small single-copy region (SSC, 18,277 bp).
View Article and Find Full Text PDFAssembly and comparative analysis of the complete mitochondrial genome of red raspberry (Rubus idaeus L.) revealing repeat-mediated recombination and gene transfer.
BMC Plant Biol
January 2025
CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, 430074, China.
Background: Red raspberry (Rubus idaeus L.) is a renowned fruit plant with significant medicinal value. Its nuclear genome and chloroplast genome (plastome) have been reported, while there is a lack of genetic information on its mitogenome.
View Article and Find Full Text PDFThe complete chloroplast genome of Diels (Apioideae), a traditional medicinal herb in China.
Mitochondrial DNA B Resour
January 2025
Enshi Tujia & Miao Autonomous Prefecture Academy of Agricultural Sciences, Enshi, Hubei, China.
Heracleum hemsleyanum Diels is a traditional medicinal herb in China. We reported its first complete chloroplast genome. The chloroplast genome was 146,775 bp in length with 37.
View Article and Find Full Text PDFMolecular phylogeny and biogeography of the genus Tulipa (Amana spp.) in East Asia.
Gene
January 2025
College of Biotechnology and Pharmaceutical Engineering, West Anhui University, Lu'an, Anhui, 237012, China. Electronic address:
The East Asian tulips (Amana spp.), which are endemic to East Asia, include the species A. edulis, recognized as the source of the traditional Chinese medicine (TCM) known as "Guangcigu.
View Article and Find Full Text PDFWant AI Summaries of new PubMed Abstracts delivered to your In-box?
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!