(Characiformes, Anostomidae): complete mtDNA sequence of an economically important fish from the Paraná and La Plata river basins.

Mitochondrial DNA B Resour

Departamento de Biologia Geral, Instituto de Ciências Biológicas - Universidade Federal de Minas Gerais, Avenida Presidente Antônio Carlos, Belo Horizonte, Brasil.

Published: May 2017

is an important commercial fish found in the La Plata and Paraná River basins. Next-generation sequencing was used to sequence the mitochondrial DNA (mtDNA) of . The mtDNA was assembled using the CLC Workbench software v. 9.0 and subsequently aligned to other 10 complete fish mitochondrial sequences to enable phylogenetic analysis using MEGA 7.0. The complete mtDNA molecule had 16,784 bp and its GC content was 43%. The mtDNA structure was similar to that of other vertebrates: two ribosomal RNA, 22 transfer RNA, 13 protein-coding genes, and a D-loop region containing 1115 bp. Phylogenetic analysis yielded a tree with high bootstrap value that was coherent with the current phylogeny proposed for Characiformes.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800035PMC
http://dx.doi.org/10.1080/23802359.2017.1318685DOI Listing

Publication Analysis

Top Keywords

complete mtdna
8
river basins
8
phylogenetic analysis
8
mtdna
5
characiformes anostomidae
4
anostomidae complete
4
mtdna sequence
4
sequence economically
4
economically fish
4
fish paraná
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!