Graph convolution networks (GCN) have been successfully applied in disease prediction tasks as they capture interactions (i.e., edges and edge weights on the graph) between individual elements. The interactions in existing works are constructed by fusing similarity between imaging information and distance between non-imaging information, whereas disregarding the disease status of those individuals in the training set. Besides, the similarity is being evaluated by computing the correlation distance between feature vectors, which limits prediction performance, especially for predicting significant memory concern (SMC) and mild cognitive impairment (MCI). In this paper, we propose three mechanisms to improve GCN, namely similarity-aware adaptive calibrated GCN (SAC-GCN), for predicting SMC and MCI. First, we design a similarity-aware graph using different receptive fields to consider disease status. The labelled subjects on the graph are only connected with those labelled subjects with the same status. Second, we propose an adaptive mechanism to evaluate similarity. Specifically, we construct initial GCN with evaluating similarity by using traditional correlation distance, then pre-train the initial GCN by using training samples and use it to score all subjects. Then, the difference between these scores replaces correlation distance to update similarity. Last, we devise a calibration mechanism to fuse functional magnetic resonance imaging (fMRI) and diffusion tensor imaging (DTI) information into edges. The proposed method is tested on the Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset. Experimental results demonstrate that our proposed method is useful to predict disease-induced deterioration and superior to other related algorithms, with a mean classification accuracy of 86.83% in our prediction tasks.
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http://dx.doi.org/10.1016/j.media.2020.101947 | DOI Listing |
Sci Rep
December 2024
Department of Forensic Medicine, Graduate School of Medicine, Kyoto Prefectural University of Medicine, Kyoto, 602-8566, Japan.
The position of the mental foramen is reported to change with age. This study aimed to examine age-related changes in the position of the mental foramen in men and women. Among 200 cases (age 21-100 years; 400 foramina) that underwent postmortem computed tomography, 109 (age 21-93 years; 218 foramina) with mandibular first and second premolars were examined using image analysis software to classify the position of the mental foramen according to Fishel's classification, and the χ² test was performed.
View Article and Find Full Text PDFNat Commun
December 2024
Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St Lucia, Queensland, 4072, Australia.
The relationship between intra-specific and inter-specific patterns and processes over evolutionary time is key to ecological investigations. We examine this relationship taking an approach of focussing on the association between vegetation and floristic classifications, summaries of inter-specific processes, and intra-specific genetic structuring. Applying an innovative, multispecies, and standardised population genomic approach, we test the relationship between vegetation mapping schemes and structuring of genetic variation across a large, environmentally heterogenous region in eastern Australia.
View Article and Find Full Text PDFHeart Rhythm
December 2024
School of Biomedical Engineering and Imaging Sciences, King's College London, UK.
Background: Electrocardiographic imaging (ECGi) is a non-invasive technique for ventricular tachycardia (VT) ablation planning. However, it is limited to reconstructing epicardial surface activation. In-silico pace mapping combines a personalized computational model with clinical electrocardiograms (ECGs) to generate a virtual 3D pace map.
View Article and Find Full Text PDFRespir Med
December 2024
Department for Pulmonary Medicine, Allergology and Clinical Immunology, Inselspital, Bern University Hospital, University of Bern, Switzerland; Lung Precision Medicine (LPM), Department for BioMedical Research (DBMR), University of Bern, Switzerland. Electronic address:
Background: Pulmonary rehabilitation (PR) aims to improve patients' functioning in interstitial lung disease (ILD) and chronic obstructive pulmonary disease (COPD). The impact of change in functional independence during PR on subsequent survival has not been established. We aimed to determine functional independence during PR and its association with survival over three years post-PR.
View Article and Find Full Text PDFInt J Biol Macromol
December 2024
Shaanxi Key Laboratory of Molecular Biology for Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China. Electronic address:
Milk production is the most important economic trait of dairy goats and a key indicator for genetic improvement and breeding. However, milk production is a complex phenotypic trait, and its genetic mechanisms are still not fully understood. This study focuses on dairy goats and non-dairy goats.
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