is a rare, famous ornamental and important medical tree endemic to China. Here, we assembled the complete chloroplast (cp) genome sequence of . Its length is 159,715 bp with four sub-regions: 87,906 bp of large single-copy region and 18,761 bp of small single-copy region are separated by two inverted repeats regions, each 26,524 bp. The genome contains 77 protein-coding genes, 6 rRNAs, and 29 tRNAs genes. Phylogenetic analysis of cp genome of with previously reported chloroplast genomes in shows that is close to with high bootstrap value.
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http://dx.doi.org/10.1080/23802359.2020.1717391 | DOI Listing |
BMC Plant Biol
January 2025
College of Forestry, Southwest Forestry University, Kunming, Yunnan, 650224, China.
Background: Phaius Lour. (Collabieae, Orchidaceae) is a small genus consisting of about 45 species, with highly ornamental and medicinal values. However, the phylogenetic relationship of Phaius among Calanthe s.
View Article and Find Full Text PDFFront Genet
December 2024
College of Smart Agriculture, Chongqing University of Arts and Sciences, Chongqing, China.
Background: Zanthoxylum L., an important genus in the Rutaceae family, has great edible and medical values. However, the high degree of morphological similarity among species and the lack of sufficient chloroplast (cp) genomic resources have greatly impeded germplasm identification and phylogenetic analyses of
Methods: Here we assembled cp genomes of five widespread species (, , , and ) in China as a case study, comparative analysis of these assembled cp genomes.
Mitochondrial DNA B Resour
December 2024
School of Pharmacy, Liaoning University of Traditional Chinese Medicine, Dalian, China.
Thunb. (1784) is primarily distributed in eastern Asia, has a total length of 152,778 bp and consists of a large single copy (LSC) region of 84,517 bp, a small single copy (SSC) region of 18,277 bp, and two inverted repeat (IRs) regions of 24,992 bp . The GC content is 37.
View Article and Find Full Text PDFMitochondrial DNA B Resour
December 2024
Ministry of Education, Key Laboratory of Land Resources Evaluation and Monitoring in Southwest (Sichuan Normal University), Chengdu, China.
In this study, we studied the complete chloroplast (cp) genome of F. H. Chen & C.
View Article and Find Full Text PDFMitochondrial DNA B Resour
December 2024
Ningxia Technical College of Wine and Desertification Prevention, Yinchuan, Ningxia, China.
var. (2010), is a new variety of in Solanaceae. Here, we sequenced, assembled, and annotated the complete chloroplast (cp) genome of var.
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