Here, the complete chloroplast (cp) genome of was reported. The genome is 155,531 bp long, with a GC content of 36.71%, and contains four sub-regions: 84,395 bp of large single copy (LSC) and 16,218 bp of small single copy (SSC) regions, separated by 27,459 bp of inverted repeat (IR) regions. A total of 129 genes were annotated, including 83 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The Phylogenetic analyses based on the whole cp genome sequence placed into a clade containing , , , and . This is the first complete cp genome for that would be useful for phylogenetic and population genetic studies of this species.
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http://dx.doi.org/10.1080/23802359.2019.1666041 | DOI Listing |
Int J Mol Sci
January 2025
College of Pharmacy, Fujian University of Traditional Chinese Medicine, Fuzhou 350122, China.
s.s. belongs to the Cercidoideae subfamily, located at the base of the Leguminosae family.
View Article and Find Full Text PDFInt J Mol Sci
December 2024
Co-Innovation Center for Sustainable Forestry in Southern China, College of Life Science, Nanjing Forestry University, Nanjing 210037, China.
is a member of the Styracaceae family, which is well-known for its remarkable ornamental and medicinal properties. In this research, we conducted comparative analysis of the chloroplast genomes from four samples of representing . The results demonstrated that the chloroplast genome of four samples ranging from 157,103 bp to 158,357 bp exhibited a typical quadripartite structure, including one large single-copy (LSC) region (90,131 bp to 90,342 bp), one small single-copy (SSC) region (18,467 bp to 18,785 bp), and two inverted repeat regions (IRs) (24,115 bp to 24,261 bp).
View Article and Find Full Text PDFBMC Plant Biol
January 2025
College of Forestry, Southwest Forestry University, Kunming, Yunnan, 650224, China.
Background: Phaius Lour. (Collabieae, Orchidaceae) is a small genus consisting of about 45 species, with highly ornamental and medicinal values. However, the phylogenetic relationship of Phaius among Calanthe s.
View Article and Find Full Text PDFFront Genet
December 2024
College of Smart Agriculture, Chongqing University of Arts and Sciences, Chongqing, China.
Background: Zanthoxylum L., an important genus in the Rutaceae family, has great edible and medical values. However, the high degree of morphological similarity among species and the lack of sufficient chloroplast (cp) genomic resources have greatly impeded germplasm identification and phylogenetic analyses of
Methods: Here we assembled cp genomes of five widespread species (, , , and ) in China as a case study, comparative analysis of these assembled cp genomes.
Mitochondrial DNA B Resour
December 2024
School of Pharmacy, Liaoning University of Traditional Chinese Medicine, Dalian, China.
Thunb. (1784) is primarily distributed in eastern Asia, has a total length of 152,778 bp and consists of a large single copy (LSC) region of 84,517 bp, a small single copy (SSC) region of 18,277 bp, and two inverted repeat (IRs) regions of 24,992 bp . The GC content is 37.
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