The complete chloroplast genome sequence of (Orchidaceae).

Mitochondrial DNA B Resour

Department of Plant Taxonomy and Nature Conservation, Faculty of Biology, University of Gdańsk, Gdańsk, Poland.

Published: July 2019

Here, we report the first complete chloroplast genome of (Orchidaceae: Orchidoideae). The circular genome with the length of 154,260 bp possesses the typical structure consisting of a large single copy region (LSC) of 83,279 bp and a small single copy region (SSC) of 17,759 bp, separated from each other by two copies of inverted repeats (IRs) of 26,611 bp. The plastome encodes 134 genes, of which 88 were protein-coding, eight encoded ribosomal RNA, and 38 transfer RNAs. The overall GC content was 36.74%. The plastome sequence provided here constitutes a valuable resource for analyzing genetic diversity of the family.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706912PMC
http://dx.doi.org/10.1080/23802359.2019.1644551DOI Listing

Publication Analysis

Top Keywords

complete chloroplast
8
chloroplast genome
8
single copy
8
copy region
8
genome sequence
4
sequence orchidaceae
4
orchidaceae report
4
report complete
4
genome orchidaceae
4
orchidaceae orchidoideae
4

Similar Publications

Molecular chaperones are essential throughout a protein's life and act already during protein synthesis. Bacteria and chloroplasts of plant cells share the ribosome-associated chaperone trigger factor (Tig1 in plastids), facilitating maturation of emerging nascent polypeptides. While typical trigger factor chaperones employ three domains for their task, the here described truncated form, Tig2, contains just the ribosome binding domain.

View Article and Find Full Text PDF

Paper mulberry is a fiber resource for paper making. Washi, a traditional paper in Japan, has been produced from × , a hybrid between and . Elite strains have been vegetatively propagated and distributed within Japan.

View Article and Find Full Text PDF

L. 1754, a thorny deciduous tree of Fabaceae, contains various chemical compounds such as alkaloids, flavonoids, and triterpenoids and exhibits anti-depressant, anti-inflammatory, and antidiabetic activities. However, genomic data of are limited.

View Article and Find Full Text PDF

A complete chloroplast genome of S. S. Lai 2004 (Crassulaceae: Crassuloideae).

Mitochondrial DNA B Resour

January 2025

Academy of Agricultural Planning and Engineering, Ministry of Agriculture and Rural Affairs, Beijing, China.

We determined the complete chloroplast genome sequence of S. S. Lai 2004.

View Article and Find Full Text PDF

Plant cells have two major organelles with their own genomes: chloroplasts and mitochondria. While chloroplast genomes tend to be structurally conserved, the mitochondrial genomes of plants, which are much larger than those of animals, are characterized by complex structural variation. We introduce TIPPo, a user-friendly, reference-free assembly tool that uses PacBio high-fidelity long-read data and that does not rely on genomes from related species or nuclear genome information for the assembly of organellar genomes.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!