Lindl. is an endangered species of Orchidaceae and distributed in China and Bhutan, India, Myanmar, Nepal, and Vietnam. Here, we report the complete chloroplast (cp) genome sequence and the cp genome features of The complete chloroplast (cp) genome sequence of is 156,327 bp in length and including one large single-copy region (LSC, 85,404 bp), one small single-copy region (SSC, 20,021 bp), and two inverted repeat regions (IRs, 25,426 bp). The cp genome encoded 136 genes, of which 107 were unique genes (80 protein-coding genes, 23 tRNAs, and four rRNAs). The phylogenetic relationships show that is closely related to other species in the genus and is sister with .
Download full-text PDF |
Source |
|---|---|
| http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687648 | PMC |
| http://dx.doi.org/10.1080/23802359.2019.1638322 | DOI Listing |
Publication Analysis
Top Keywords
Similar Publications
Genetic Diversity on Farm in Japanese Paper Mulberry.
Ecol Evol
January 2025
Faculty of Agriculture and Life Science, Hirosaki University Hirosaki Aomori Japan.
Paper mulberry is a fiber resource for paper making. Washi, a traditional paper in Japan, has been produced from × , a hybrid between and . Elite strains have been vegetatively propagated and distributed within Japan.
View Article and Find Full Text PDFThe Complete Chloroplast Genome of L. (Papilionoideae, Fabaceae).
Ecol Evol
January 2025
Functional Genomics Research Center, NTT Hi-Tech Institute Nguyen Tat Thanh University Ho Chi Minh City Vietnam.
L. 1754, a thorny deciduous tree of Fabaceae, contains various chemical compounds such as alkaloids, flavonoids, and triterpenoids and exhibits anti-depressant, anti-inflammatory, and antidiabetic activities. However, genomic data of are limited.
View Article and Find Full Text PDFA complete chloroplast genome of S. S. Lai 2004 (Crassulaceae: Crassuloideae).
Mitochondrial DNA B Resour
January 2025
Academy of Agricultural Planning and Engineering, Ministry of Agriculture and Rural Affairs, Beijing, China.
We determined the complete chloroplast genome sequence of S. S. Lai 2004.
View Article and Find Full Text PDFTIPPo: A User-Friendly Tool for De Novo Assembly of Organellar Genomes with High-Fidelity Data.
Mol Biol Evol
January 2025
Department of Molecular Biology, Max Planck Institute for Biology Tübingen, 72076 Tübingen, Germany.
Plant cells have two major organelles with their own genomes: chloroplasts and mitochondria. While chloroplast genomes tend to be structurally conserved, the mitochondrial genomes of plants, which are much larger than those of animals, are characterized by complex structural variation. We introduce TIPPo, a user-friendly, reference-free assembly tool that uses PacBio high-fidelity long-read data and that does not rely on genomes from related species or nuclear genome information for the assembly of organellar genomes.
View Article and Find Full Text PDFProtocol for the purification of the plastid-encoded RNA polymerase from transplastomic tobacco plants.
STAR Protoc
January 2025
National Key Laboratory of Crop Genetic Improvement and National Centre of Plant Gene Research, Huazhong Agricultural University, Wuhan 430070, China. Electronic address:
The plastid-encoded RNA polymerase (PEP) plays an essential role in the transcription of the chloroplast genome. Here, we present a strategy to purify the transcriptionally active protein complex from transplastomic tobacco (Nicotiana tabacum) lines in which one of the PEP core subunits is fused to an epitope tag. We describe experimental procedures for designing transformation constructs for PEP purification, selection, and analysis of transplastomic tobacco plants.
View Article and Find Full Text PDFWant AI Summaries of new PubMed Abstracts delivered to your In-box?
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!