species are Gram-negative, facultative intracellular pathogens. They are the main cause of brucellosis, which has led to a global health burden. Adherence of the pathogen to the host cells is the first step in the infection process. The bacteria can adhere to various biotic and abiotic surfaces using their outer membrane proteins. Trimeric autotransporter adhesins (TAAs) are modular homotrimers of various length and domain complexity. They are a diverse, and widespread gene family constituting the type Vc secretion pathway. These adhesins have been established as virulence factors in . To date, no comprehensive and exhaustive study has been performed on the trimeric autotransporter family in the genus. In the present study, various bioinformatics tools were used to provide a novel evolutionary insight into the sequence and structure of this protein family in . To this end, a dataset of all trimeric autotransporters from the genomes was built. Analyses included but were not limited to sequence alignment, phylogenetic tree constructions, codon-based test for selection, clustering of the sequences, and structure (primary to quaternary) predictions. Batch analyzes of the dataset suggested the existence of a few structural domains within the whole population. BatA from the 2308 genome was selected as a reference to describe the features of these structural domains. Furthermore, we examined the structural basis for the observed rigidity and resiliency of the protein structure through a molecular dynamics evaluation, which led us to deduce that the random drift results in the non-adaptive evolution of the trimeric autotransporter genes in the genus. Notably, the modifications have occurred across the genus without interference of gene transmission.
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http://dx.doi.org/10.3389/fmicb.2020.560667 | DOI Listing |
mBio
January 2025
Antimicrobial Resistance, Omics and Microbiota Group, Centre for Systems Health and Integrated Metabolic Research, Department of Biosciences, Nottingham Trent University, Nottingham, United Kingdom.
is an unusual diderm firmicute that plays a central role in the formation of dental biofilm formation through coaggregation with many other oral bacteria. However, the molecular interactions leading to oral biofilm formation are largely unknown. In a recent study (L.
View Article and Find Full Text PDFJ Bacteriol
December 2024
Department of Biomolecular Engineering, Graduate School of Engineering, Nagoya University, Nagoya, Aichi, Japan.
Unlabelled: The methylation of ε-amino groups in protein lysine residues is an important posttranslational modification in eukaryotes. This modification plays a pivotal role in the regulation of diverse biological processes, including epigenetics, transcriptional control, and cellular signaling. Recent research has begun to reveal the potential role of methylation in modulating bacterial immune evasion and adherence to host cells.
View Article and Find Full Text PDFPathogens
November 2024
Department of Oral Biology, Rutgers School of Dental Medicine, 110 Bergen, Newark, NJ 07103, USA.
ApiA is a trimeric autotransporter outer membrane protein (Omp) that participates in multiple functions, enabling to adapt to a variety of environments. The goal of this study is to identify regions in the gene responsible for three of these functions: auto-aggregation, buccal epithelial cell binding, and complement resistance. Initially, was expressed in .
View Article and Find Full Text PDFmBio
December 2024
Institut Pasteur, Université Paris Cité, CNRS UMR6047, Genetics of Biofilms Laboratory, Paris, France.
Unlabelled: The dental plaque is a polymicrobial community where biofilm formation and co-aggregation, the ability to bind to other bacteria, play a major role in the construction of an organized consortium. One of its prominent members is the anaerobic diderm considered a bridging species, which growth depends on lactate produced by oral streptococci. Understanding how co-aggregates and the impact of aggregation has long been hampered due to the lack of appropriate genetic tools.
View Article and Find Full Text PDFbioRxiv
October 2024
Department of Integrative Biology, The University of Texas at Austin, Austin, TX 78712, USA.
Bacterial biofilms are stable multicellular structures that can enable long term host association. Yet, the role of biofilms in supporting gut mutualism is still not fully understood. Here, we investigate , a beneficial bacterial symbiont of honey bees, and find that biofilm formation is required for its colonization of the bee gut.
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