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Solving Stochastic Reaction Networks with Maximum Entropy Lagrange Multipliers. | LitMetric

Solving Stochastic Reaction Networks with Maximum Entropy Lagrange Multipliers.

Entropy (Basel)

Department of Chemical Engineering and Materials Science, University of Minnesota, Minneapolis, MN 55455, USA.

Published: September 2018

AI Article Synopsis

Article Abstract

The time evolution of stochastic reaction networks can be modeled with the chemical master equation of the probability distribution. Alternatively, the numerical problem can be reformulated in terms of probability moment equations. Herein we present a new alternative method for numerically solving the time evolution of stochastic reaction networks. Based on the assumption that the entropy of the reaction network is maximum, Lagrange multipliers are introduced. The proposed method derives equations that model the time derivatives of these Lagrange multipliers. We present detailed steps to transform moment equations to Lagrange multiplier equations. In order to demonstrate the method, we present examples of non-linear stochastic reaction networks of varying degrees of complexity, including multistable and oscillatory systems. We find that the new approach is as accurate and significantly more efficient than Gillespie's original exact algorithm for systems with small number of interacting species. This work is a step towards solving stochastic reaction networks accurately and efficiently.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7513230PMC
http://dx.doi.org/10.3390/e20090700DOI Listing

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