Luteimonas wenzhouensis Sp. Nov., A Chitinolytic Bacterium Isolated from a Landfill Soil.

Curr Microbiol

State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800, P.R. China.

Published: January 2021

A Gram-staining-negative, aerobic, non-motile, rod-shaped bacterium with degradation ability of chitin, designated strain YD-1, was isolated from landfill soil sample collected in Wenzhou, Zhejiang province, China. The growth of strain YD-1 occurred optimally in the tryptone soy broth (TSB) with 1.0% NaCl at pH 7.0-8.0, 30 °C. Ubiquinone-8 (Q-8) was the predominant quinone. The polar lipids of strain YD-1 consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine, five glycolipids and four lipids. The major fatty acids were iso-C (30.7%), iso-Cω9c (23.2%), iso-C (18.9%), iso-C 3-OH (6.8%) and iso-C (5.9%). Phylogenetic analysis based on the 16S rRNA gene sequences indicated that strain YD-1 was affiliated to the genus Luteimonas with the highest similarity to Luteimonas marina KCTC 12327 (97.3%), followed by Luteimonas aquatica DSM 22088 (96.5%) and Luteimonas composti CCUG 53595 (96.4%). The genomic DNA G + C content of strain YD-1 was 71.8 mol%. Average nucleotide identity (ANI) and the digital DNA-DNA hybridizations (dDDH) for draft genomes between strain YD-1 and Luteimonas marina KCTC 12327 were 82.7% and 26.1%, respectively. On the basis of genotypic, phenotypic and chemotaxonomic data, strain YD-1 is considered to represent a novel species to degrade chitin in the genus Luteimonas, for which the name Luteimonas wenzhouensis sp. nov. is proposed, with YD-1 (= KCTC 72425 = CCTCC AB 2019153) as the type strain.

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Source
http://dx.doi.org/10.1007/s00284-020-02293-9DOI Listing

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