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The ability to detect and monitor infectious disease in a phylogenetically informative manner is critical for their management. Phylogenetically informative diagnostic tests enable patterns of pathogen introduction or changes in the distribution of genotypes to be measured, enabling research into the ecology of the pathogen. Batrachochytrium dendrobatidis (Bd), a causative agent of chytridiomycosis in amphibian populations, emerged worldwide in the 21st century and is composed of six lineages which are display varying levels of virulence in their hosts. Research into the distribution, ecology and pathogenicity of these lineages has been hampered by an inability to type lineage efficiently. Here, we describe a lineage-specific TaqMan qPCR assay that differentiates the two lineages of Bd most commonly associated with chytridiomycosis: BdGPL and BdCAPE. We demonstrate how this assay can be used for the surveillance of wild populations of amphibians in Southern Africa using skin swabs, tissue samples and cultured isolates.
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8651002 | PMC |
http://dx.doi.org/10.1111/1755-0998.13299 | DOI Listing |
G3 (Bethesda)
December 2024
MRC Centre for Medical Mycology, University of Exeter, Geoffrey Pope Building, Stocker Road, Exeter, United Kingdom, EX4 4QD.
Batrachochytrium dendrobatidis (Bd) is responsible for mass extinctions and extirpations of amphibians, mainly driven by the Global Panzootic Lineage (BdGPL). BdGPL isolate JEL423 is a commonly used reference strain in studies exploring the evolution, epidemiology and pathogenicity of chytrid pathogens. These studies have been hampered by the fragmented, erroneous and incomplete B.
View Article and Find Full Text PDFDis Aquat Organ
December 2024
Department of Biology, Texas State University, San Marcos, TX 78666, USA.
Considerable attention has been directed to studying the infection dynamics of the fungal pathogen Batrachochytrium dendrobatidis (Bd) affecting amphibians in the high elevations of the Neotropics. However, lowland forests of the same realm remain comparatively understudied in this context. Herein, we attempt to bridge this gap by measuring the prevalence of Bd via quantitative polymerase chain reaction (qPCR) in several anuran taxa inhabiting the Amazonian lowlands in the northeast of Ecuador.
View Article and Find Full Text PDFDis Aquat Organ
December 2024
Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Thermal acclimation effects on locomotory performance have been widely documented for macroscopic organisms, but such responses remain largely unexplored in microorganisms. Metabolic theory of ecology (MTE) predicts faster responses in smaller organisms, with potential consequences for host-parasite interactions in variable temperature environments. We investigated thermal acclimation effects on zoospores of the amphibian fungal pathogen Batrachochytrium dendrobatidis (Bd), quantifying (1) thermal performance for maximum zoospore velocity and (2) high temperatures needed to immobilize 50% (CT50max) or 100% (CT100max) of zoospores.
View Article and Find Full Text PDFOecologia
December 2024
Department of Biological Sciences, University of Pittsburgh, 105 Clapp Hall, 5th and Ruskin Aves., Pittsburgh, PA, 15260, USA.
Aquatic pathogens often cannot tolerate drying, and thus their spread, and diversity across a landscape may depend on interactions between hydrological conditions and the movement of infected hosts. The aquatic fungus Batrachochytrium dendrobatidis (Bd) is a nearly ubiquitous pathogen of amphibians and particular lineages have been associated with host declines. By coupling amphibian surveys with molecular pathogen detection and genotyping techniques, we characterized the spatial dynamics and genetic diversity of Bd on a landscape containing both permanent and ephemeral ponds.
View Article and Find Full Text PDFJ Aquat Anim Health
December 2024
Department of Comparative Pathobiology, College of Veterinary Medicine, Purdue University, West Lafayette, Indiana, USA.
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