An analysis of non-cultivable bacteria using WEKA.

Bioinformation

Department of Bioinformatics, Rajiv Gandhi Institute of IT and Biotechnology, Bharati Vidyapeeth Deemed University, Pune, Maharashtra, India.

Published: August 2020

The study of metagenomics from high throughput sequencing data processed through Waikato Environment for Knowledge Analysis (WEKA) is gaining momentum in recent years. Therefore, we report an analysis of metagenome data generated using T-RFLP followed by using the SMO (Sequential minimal optimization) algorithm in WEKA to identify the total amount of cultured and uncultured microorganism present in the sample collected from multiple sources.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7649025PMC
http://dx.doi.org/10.6026/97320630016620DOI Listing

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