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Genomic sequencing of two isolates of Ralstonia solanacearum causing Sergipe facies and comparative analysis with Bugtok disease isolates. | LitMetric

AI Article Synopsis

  • Ralstonia solanacearum causes Moko disease in bananas, specifically manifesting as "Sergipe facies" in northeastern Brazil, which has symptoms akin to Bugtok disease found in the Philippines.
  • The study sequenced and analyzed the genomes of two isolates linked to Sergipe facies (SFC and IBSBF2570) and compared them to Bugtok disease isolates, revealing that the Sergipe facies genomes were 5.58 Mb and 5.46 Mb in length across 185 and 174 contigs.
  • Despite high genomic similarity between Sergipe facies and Bugtok disease isolates, Bugtok isolates showed a greater diversity in gene clusters, suggesting a longer interaction period may contribute to their

Article Abstract

Ralstonia solanacearum is the causal agent of Moko disease in bananas, which in the state of Sergipe in northeastern Brazil causes "Sergipe facies". This disease induces atypical symptoms similar to those of Bugtok disease in the Philippines. This study was conducted to sequence, assemble, and annotate the genomes of the Sergipe facies-causing isolates SFC and IBSBF2570 (sequevar IIA-53) and compare their genomes with two representative isolates causing Bugtok disease. The genomes were sequenced and assembled, resulting in lengths of 5.58 Mb (SFC) and 5.46 Mb (IBSBF2570) in 185 and 174 contigs, respectively. The isolates of Sergipe facies and Bugtok disease showed similarities in their gene contents. We identified 5,668 information clusters, 3,752 of which were shared by all genomes (core genes). Moreover, 3,585 single-copy genes were identified. Isolates causing Bugtok disease exclusively shared 266 more information clusters than the isolates causing Sergipe facies. These results suggest that Sergipe facies and Bugtok disease isolates show high genomic similarity. However, the similarity is even greater between the Bugtok disease isolates. This may be because of their longer period of interaction compared to Sergipe facies isolates.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783953PMC
http://dx.doi.org/10.1590/1678-4685-GMB-2020-0155DOI Listing

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