By changing the lifestyle and increasing the cancer incidence, accurate diagnosis becomes a significant medical action. Today, DNA microarray is widely used in cancer diagnosis and screening since it is able to measure gene expression levels. Analyzing them by using common statistical methods is not suitable because of the high gene expression data dimensions. So, this study aims to use new techniques to diagnose acute myeloid leukemia. In this study, the leukemia microarray gene data, contenting 22283 genes, was extracted from the Gene Expression Omnibus repository. Initial preprocessing was applied by using a normalization test and principal component analysis in Python. Then DNNs neural network designed and implemented to the data and finally results cross-validated by classifiers. The normalization test was significant (P>0.05) and the results show the PCA gene segregation potential and independence of cancer and healthy cells. The results accuracy for single-layer neural network and DNNs deep learning network with three hidden layers are 63.33 and 96.67, respectively. Using new methods such as deep learning can improve diagnosis accuracy and performance compared to the old methods. It is recommended to use these methods in cancer diagnosis and effective gene selection in various types of cancer.
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http://dx.doi.org/10.25122/jml-2019-0090 | DOI Listing |
Clin Oral Implants Res
January 2025
Department of Oral and Maxillofacial Radiology, School of Dentistry, Kashan University of Medical Sciences, Kashan, Iran.
Objective: This study evaluated ResNet-50 and U-Net models for detecting and segmenting vertical misfit in dental implant crowns using periapical radiographic images.
Methods: Periapical radiographs of dental implant crowns were classified by two experts based on the presence of vertical misfit (reference group). The misfit area was manually annotated in images exhibiting vertical misfit.
Adv Sci (Weinh)
January 2025
Department of General Surgery, Tangdu Hospital, Air Force Medical University, Xi'an, 710038, P. R. China.
Leaky and structurally abnormal blood vessels and increased pressure in the tumor interstitium reduce the infiltration of CAR-T cells in solid tumors, including triple-negative breast cancer (TNBC). Furthermore, high burden of tumor cells may cause reduction of infiltrating CAR-T cells and their functional exhaustion. In this study, various effector-to-target (E:T) ratio experiments are established to model the treatment using CAR-T cells in leukemia (high E:T ratio) and solid tumor (low E:T ratio).
View Article and Find Full Text PDFFront Plant Sci
January 2025
College of Engineering, South China Agricultural University, Guangzhou, China.
Introduction: Accurate detection and recognition of tea bud images can drive advances in intelligent harvesting machinery for tea gardens and technology for tea bud pests and diseases. In order to realize the recognition and grading of tea buds in a complex multi-density tea garden environment.
Methods: This paper proposes an improved YOLOv7 object detection algorithm, called YOLOv7-DWS, which focuses on improving the accuracy of tea recognition.
Front Plant Sci
January 2025
Information and Communication Engineering, Yeungnam University, Gyeongsan, Republic of Korea.
Smart farming is a hot research area for experts globally to fulfill the soaring demand for food. Automated approaches, based on convolutional neural networks (CNN), for crop disease identification, weed classification, and monitoring have substantially helped increase crop yields. Plant diseases and pests are posing a significant danger to the health of plants, thus causing a reduction in crop production.
View Article and Find Full Text PDFFront Genet
January 2025
Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, United States.
Recent advancements in deep learning, particularly large language models (LLMs), made a significant impact on how researchers study microbiome and metagenomics data. Microbial protein and genomic sequences, like natural languages, form a , enabling the adoption of LLMs to extract useful insights from complex microbial ecologies. In this paper, we review applications of deep learning and language models in analyzing microbiome and metagenomics data.
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