A PHP Error was encountered

Severity: Warning

Message: file_get_contents(https://...@pubfacts.com&api_key=b8daa3ad693db53b1410957c26c9a51b4908&a=1): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests

Filename: helpers/my_audit_helper.php

Line Number: 176

Backtrace:

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 176
Function: file_get_contents

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 250
Function: simplexml_load_file_from_url

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 1034
Function: getPubMedXML

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3152
Function: GetPubMedArticleOutput_2016

File: /var/www/html/application/controllers/Detail.php
Line: 575
Function: pubMedSearch_Global

File: /var/www/html/application/controllers/Detail.php
Line: 489
Function: pubMedGetRelatedKeyword

File: /var/www/html/index.php
Line: 316
Function: require_once

: An overlooked lineage of diverse endophytes. | LitMetric

: An overlooked lineage of diverse endophytes.

Stud Mycol

Ottawa Research and Development Centre, Biodiversity (Mycology and Microbiology), Agriculture and Agri-Food Canada, 960 Carling Avenue, Ottawa, Ontario, K1A 0C6, Canada.

Published: March 2020

is a taxonomically neglected discomycete genus () of commonly encountered saprotrophs on decaying plant tissues throughout temperate regions. The combination of indistinct morphological characters, more than 700 names in the literature, and lack of reference DNA sequences presents a major challenge when working with . Unidentified endophytes, including strains that produced antifungal or antiinsectan secondary metabolites, were isolated from conifer needles in New Brunswick and placed with uncertainty in and , necessitating a more comprehensive treatment of these genera. In this study, morphology and multigene phylogenetic analyses were used to explore the taxonomy of , including , , and related genera, using new field collections, herbarium specimens, and accessioned cultures and sequences. The phylogeny of was reconstructed and compared using the nuc internal transcribed spacer rDNA (ITS) barcode and partial sequences of the 28S nuc rDNA (LSU) gene, largest subunit of RNA polymerase II (), DNA topoisomerase I (), and the hypothetical protein Lipin/Ned1/Smp2 (). The results show that endophytism is common throughout the lineage in a diverse range of hosts but is infrequently attributed to because of a paucity of reference sequences. Generic boundaries within are poorly resolved and based on phylogenetic evidence the family included species placed in , , , , , , , , , , , (=), and Taxonomic novelties included the description of five novel species and five novel species and the synonymy of with , with , and with .

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7426276PMC
http://dx.doi.org/10.1016/j.simyco.2020.02.005DOI Listing

Publication Analysis

Top Keywords

lineage diverse
8
novel species
8
overlooked lineage
4
diverse endophytes
4
endophytes taxonomically
4
taxonomically neglected
4
neglected discomycete
4
discomycete genus
4
genus commonly
4
commonly encountered
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!