RecA is essential for double-strand-break repair (DSBR) and the SOS response in K-12. RecN is an SOS protein and a member of the Structural Maintenance of Chromosomes family of proteins thought to play a role in sister chromatid cohesion/interactions during DSBR. Previous studies have shown that a plasmid-encoded (Q300R) mutant had a phenotype similar to ∆ (mitomycin C sensitive and UV resistant). It was hypothesized that RecN and RecA physically interact, and that specifically eliminated this interaction. To test this model, an epistasis analysis between and ∆ was performed in wild-type and cells. To do this, was first transferred to the chromosome. As single mutants, and ∆ were Rec as measured by transductional recombination, but were 3-fold and 10-fold decreased in their ability to do I-SceI-induced DSBR, respectively. In both cases, the double mutant had an additive phenotype relative to either single mutant. In the background, and ∆ cells were very UV (sensitive), Rec, had high basal levels of SOS expression and an altered distribution of RecA-GFP structures. In all cases, the double mutant had additive phenotypes. These data suggest that (Q300R) and ∆ remove functions in genetically distinct pathways important for DNA repair, and that RecA Q300 was not important for an interaction between RecN and RecA (Q300R) revealed modest phenotypes in a wild-type background and dramatic phenotypes in a strain, reflecting greater stringency of RecA's role in that background.
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http://dx.doi.org/10.1534/genetics.120.303476 | DOI Listing |
Database (Oxford)
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The Morris Kahn Laboratory of Human Genetics at the National Institute of Biotechnology in the Negev and Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer Sheva 84105, Israel.
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December 2024
Department of Ecology and Evolution, University of Chicago, Chicago, IL, USA.
We recently reanalyzed 20 combinatorial mutagenesis datasets using a novel reference-free analysis (RFA) method and showed that high-order epistasis contributes negligibly to protein sequence-function relationships in every case. Dupic, Phillips, and Desai (DPD) commented on a preprint of our work. In our published paper, we addressed all the major issues they raised, but we respond directly to them here.
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December 2024
Departamento de Ingeniería de la Información y las Comunicaciones, Universidad de Murcia, Murcia 30100, Spain.
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College of Horticulture, China Agricultural University, Beijing, 100193, China.
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