The search for biomarkers allowing the assessment of disease by early diagnosis is facilitated by liquid chromatography. However, it is not clear how many components are lost due to being present in concentrations below the detection limit and/or being obscured by chromatographic peak overlap. First, we extend the study of missing components undertaken by Enke and Nagels, who employed the log-normal probability density function (pdf) for the distribution of signal intensities (and concentrations) of three mixtures. The Weibull and exponential pdfs, which have a higher probability of small-concentration components than the log-normal pdf, are also investigated. Results show that assessments of the loss of low-intensity signals by curve fitting are ambiguous. Next, we simulate synthetic chromatograms to compare the loss of peaks from superposition (overlap) with neighboring peaks to the loss arising from lying below the limit of detection (LOD) imposed by a finite signal-to-noise ratio (SNR). The simulations are made using amplitude pdfs based on the Enke-Nagels data as functions of relative column efficiency, i.e., saturation, and SNR. Results show that at the highest efficiencies, the lowest-amplitude peaks are lost below the LOD. However, at small and medium efficiencies, peak overlap is the dominant loss mechanism, suggesting that low-level components will not be found easily in liquid chromatography with single channel detectors regardless of SNR. A simple treatment shows that a multichannel detector, e.g., a mass spectrometer, is necessary to expose more low-level components.
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http://dx.doi.org/10.1016/j.chroma.2020.461266 | DOI Listing |
Public Health Nutr
January 2025
Universite Joseph KI ZERBO, Burkina Faso.
Objective: The creation of a healthy food environment is highly dependent on the policies that governments choose to implement. The objective of this study is to compare the level of implementation of current public policies aimed at creating healthy food environments in Burkina Faso with international good practice indicators.
Design: This evaluation was carried out using the Food-EPI tool.
Comput Biol Med
December 2024
Khalifa University, Abu Dhabi, United Arab Emirates.
Background And Objective: Accurate extraction of retinal vascular components is vital in diagnosing and treating retinal diseases. Achieving precise segmentation of retinal blood vessels is challenging due to their complex structure and overlapping vessels with other anatomical features. Existing deep neural networks often suffer from false positives at vessel branches or missing fragile vessel patterns.
View Article and Find Full Text PDFVet J
December 2024
College of Animal Science and Technology, Northwest A&F University, Yangling 712100, China. Electronic address:
Immunoglobulins are important components of humoral immunity and play a crucial role in protecting the body from external antigens. The Arctic fox is an important member of furbearer farming, but due to the lack of research on the immune system of the Arctic fox, animal welfare regarding Arctic fox farming has still not received enough attention. In this study, we used the Arctic fox as a research subject, described the gene locus structure of the Arctic fox immunoglobulin germline by genome comparison, and analysed the mechanism of expression diversity of the antibody pool of the Arctic fox by rapid amplification of cDNA 5' ends and high-throughput sequencing.
View Article and Find Full Text PDFbioRxiv
December 2024
Department of Microbiology and Immunology, The University of North Carolina at Chapel Hill, School of Medicine, Chapel Hill, North Carolina, USA.
strain E264 (E264) and close relatives stochastically duplicate a 208.6 kb region of chromosome I via RecA-dependent recombination between two nearly identical insertion sequence elements. Because homologous recombination occurs at a constant, low level, populations of E264 are always heterogeneous, but cells containing two or more copies of the region (Dup+) have an advantage, and hence predominate, during biofilm growth, while those with a single copy (Dup-) are favored during planktonic growth.
View Article and Find Full Text PDFComput Methods Programs Biomed
December 2024
Computer Science and Engineering, Northeastern University, Shenyang, China; Key Laboratory of Intelligent Computing in Medical Image, Ministry of Education, Northeastern University, Shenyang, China; National Frontiers Science Center for Industrial Intelligence and Systems Optimization, Shenyang, China.
Background And Objective: Left ventricular myocardium segmentation is of great significance for clinical diagnosis, treatment, and prognosis. However, myocardium segmentation is challenging as the medical image quality is disturbed by various factors such as motion, artifacts, and noise. Its accuracy largely depends on the accurate identification of edges and structures.
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