As synthetic biocircuits become more complex, distributing computations within multi-strain microbial consortia becomes increasingly beneficial. However, designing distributed circuits that respond predictably to variation in consortium composition remains a challenge. Here we develop a two-strain gene circuit that senses and responds to which strain is in the majority. This involves a co-repressive system in which each strain produces a signaling molecule that signals the other strain to down-regulate production of its own, orthogonal signaling molecule. This co-repressive consortium links gene expression to ratio of the strains rather than population size. Further, we control the cross-over point for majority via external induction. We elucidate the mechanisms driving these dynamics by developing a mathematical model that captures consortia response as strain fractions and external induction are varied. These results show that simple gene circuits can be used within multicellular synthetic systems to sense and respond to the state of the population.
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http://dx.doi.org/10.1038/s41467-020-17475-z | DOI Listing |
J Fungi (Basel)
January 2025
Department of Soil and Plant Microbiology, Estación Experimental del Zaidín, CSIC, Profesor Albareda 1, 18008 Granada, Spain.
This review delves into innovative technologies to improve the control of vascular fungal plant pathogens. It also briefly summarizes traditional biocontrol approaches to manage them, addressing their limitations and emphasizing the need to develop more sustainable and precise solutions. Powerful tools such as next-generation sequencing, meta-omics, and microbiome engineering allow for the targeted manipulation of microbial communities to enhance pathogen suppression.
View Article and Find Full Text PDFFood Res Int
February 2025
School of Life Science, Shanxi University, Taiyuan 030006, People's Republic of China; The Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, College of Life Sciences, Nankai University, Tianjin 300071, People's Republic of China. Electronic address:
The fermented foods microbiota, whose community structures evolve through a succession of different microbial groups, play a central role in fermented food production. The texture and flavor, functions, shelf-life and safety, are largely determined by the interactions among bacteria and yeast within these communities. Although much indispensable work has described the microbial composition and succession in various fermentation foods, yet the specific microbial interactions involved are not well understood.
View Article and Find Full Text PDFHeliyon
January 2025
VIT School of Agricultural Innovations and Advanced Learning, Vellore Institute of Technology, Vellore, India.
Microbial fermentation of agro-industrial residues is gaining significant traction as a sustainable and economically viable approach in bioprocessing. This study explored lactic acid production from selected agro-industrial residues: pre-treated sugarcane waste, potato peel waste, or milk processing waste with alfalfa pellets using strains of organic origin. Five homo-fermentative strains (VITJ1, VITJ2, VITJ3, VITJ4, and VITJ5) were assessed for compatibility and formed into 15 consortia.
View Article and Find Full Text PDFFront Microbiol
January 2025
Corporación para la Investigación de la Corrosión (CIC), Piedecuesta, Colombia.
The increasing use of plastics globally has generated serious environmental and human health problems, particularly in the agricultural sector where low-density polyethylene (LDPE) and other plastics are widely used. Due to its low recycling rate and slow degradation process, LDPE is a major source of pollution. This paper addresses the problem of plastic accumulation in agriculture, focusing on LDPE biodegradation strategies.
View Article and Find Full Text PDFSynthetic microbial consortia are collections of multiple strains or species of engineered organisms living in a shared ecosystem. Because they can separate metabolic tasks among different strains, synthetic microbial consortia have myriad applications in developing biomaterials, biomanufacturing, and biotherapeutics. However, synthetic consortia often require burdensome control mechanisms to ensure that the members of the community remain at the correct proportions.
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