Cardiac small conductance Ca-activated K (SK) channels are activated solely by Ca, but the SK current (I) is inwardly rectified. However, the impact of inward rectification in shaping action potentials (APs) in ventricular cardiomyocytes under β-adrenergic stimulation or in disease states remains undefined. Two processes underlie this inward rectification: an intrinsic rectification caused by an electrostatic energy barrier from positively charged amino acids at the inner pore and a voltage-dependent Ca/Mg block. Thus, Ca has a biphasic effect on I, activating at low [Ca] yet inhibiting I at high [Ca]. We examined the effect of I rectification on APs in rat cardiomyocytes by simultaneously recording whole-cell apamin-sensitive currents and Ca transients during an AP waveform and developed a computer model of SK channels with rectification features. The typical profile of I during AP clamp included an initial peak (mean 1.6 pA/pF) followed by decay to the point that submembrane [Ca] reached ∼10 μM. During the rest of the AP stimulus, I either plateaued or gradually increased as the cell repolarized and submembrane [Ca] decreased further. We used a six-state gating model combined with intrinsic and Ca/Mg-dependent rectification to simulate I and investigated the relative contributions of each type of rectification to AP shape. This SK channel model replicates key features of I recording during AP clamp showing that intrinsic rectification limits I at high V during the early and plateau phase of APs. Furthermore, the initial rise of Ca transients activates, but higher [Ca] blocks SK channels, yielding a transient outward-like I trajectory. During the decay phase of Ca, the Ca-dependent block is released, causing I to rise again and contribute to repolarization. Therefore, I is an important repolarizing current, and the rectification characteristics of an SK channel determine its impact on early, plateau, and repolarization phases of APs.
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http://dx.doi.org/10.1016/j.bpj.2020.06.022 | DOI Listing |
ACS Appl Electron Mater
January 2025
Electrical Engineering Division, Engineering Department, University of Cambridge, Cambridge CB3 0FA, U.K.
Nanoscale semiconductors offer significant advantages over their bulk semiconductor equivalents for electronic devices as a result of the ability to geometrically tune electronic properties, the absence of internal grain boundaries, and the very low absolute number of defects that are present in such small volumes of material. However, these advantages can only be realized if reliable contacts can be made to the nanoscale semiconductor using a scalable, low-cost process. Although there are many low-cost "bottom-up" techniques for directly growing nanomaterials, the fabrication of contacts at the nanoscale usually requires expensive and slow techniques like e-beam lithography that are also hard to scale to a level of throughput that is required for commercialization.
View Article and Find Full Text PDFGeroscience
January 2025
Department of Bioengineering and QB3, University of California, Berkeley, Berkeley, CA, 94720, USA.
Biological age estimation from DNA methylation and determination of relevant biomarkers is an active research problem which has predominantly been tackled with black-box penalized regression. Machine learning is used to select a small subset of features from hundreds of thousands of CpG probes and to increase generalizability typically lacking with ordinary least-squares regression. Here, we show that such feature selection lacks biological interpretability and relevance in the clocks of the first and next generations and clarify the logic by which these clocks systematically exclude biomarkers of aging and age-related disease.
View Article and Find Full Text PDFProg Mol Biol Transl Sci
January 2025
Graduate School of Biomedical Science and Engineering, Hanyang University, Seoul, Korea; College of Medicine, Hanyang University, Seoul, Korea. Electronic address:
Genetic and environmental factors can have an impact on lung and respiratory disorders which are associated with severe symptoms and have high mortality rates. Many respiratory diseases are significantly influenced by genetic or epigenetic factors. Gene therapy offers a powerful approach providing therapeutic treatment for lung diseases.
View Article and Find Full Text PDFNanotechnology
January 2025
Department of Electrical and Computer Engineering, Nazarbayev University, Nazarbayev University, Astana, Kazakhstan, Astana, 010000, KAZAKHSTAN.
Non-equilibrium molecular dynamics (NEMD) simulations reveal the existence of a spontaneous heat current (SHC) in the absence of a temperature gradient and demonstrate ultra-high thermal rectification in asymmetric trapezoid-shaped graphene. These unique properties have potential applications in power generation and thermal circuits, functioning as thermal diodes. Our findings also show the presence of negative and zero thermal conductivity in this system.
View Article and Find Full Text PDFLow-temperature phase (β-form) barium borate (BBO) is one of the most important nonlinear crystals that has been widely used for optical second-harmonic generation (SHG), especially with femtosecond sources. There was growing interest in its applications in the direct generation of terahertz (THz) radiations, but it was hindered by the lack of knowledge of its basic properties in the THz range. In a recent study based on first-principles quantum chemistry calculation, we found that the theoretically calculated refractive indices of β-BBO in the THz frequency range do not agree with the previously reported values.
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