Toward empirical force fields that match experimental observables.

J Chem Phys

Scuola Internazionale Superiore di Studi Avanzati, Via Bonomea 265, Trieste 34136, Italy.

Published: June 2020

Biomolecular force fields have been traditionally derived based on a mixture of reference quantum chemistry data and experimental information obtained on small fragments. However, the possibility to run extensive molecular dynamics simulations on larger systems achieving ergodic sampling is paving the way to directly using such simulations along with solution experiments obtained on macromolecular systems. Recently, a number of methods have been introduced to automatize this approach. Here, we review these methods, highlight their relationship with machine learning methods, and discuss the open challenges in the field.

Download full-text PDF

Source
http://dx.doi.org/10.1063/5.0011346DOI Listing

Publication Analysis

Top Keywords

force fields
8
empirical force
4
fields match
4
match experimental
4
experimental observables
4
observables biomolecular
4
biomolecular force
4
fields traditionally
4
traditionally derived
4
derived based
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!