sp. nov., isolated from spinach farming field soil.

Int J Syst Evol Microbiol

Department of Microbiology & Resources, College of Science & Technology, Mokwon University, 88 Doanbuk-ro, Seo-gu, Daejeon 35349, Republic of Korea.

Published: June 2020

A Gram-stain-negative bacterium, designated strain YJ09, was isolated from spinach farming field soil at Shinan in the Republic of Korea. Cells of strain YJ09 were found to be strictly aerobic, non-motile, non-spore-forming creamy-yellow rods which can grow at 20-37 °C (optimum, 30 °C), at pH 6.0-9.0 (optimum, pH 7.0-8.0) and at salinities of 0-0.5 % (w/v) NaCl (optimum, 0 % NaCl). The 16S rRNA gene sequence analysis showed that strain YJ09 belongs to the genus with high sequence similarities to GP20-2 (98.0 %), HKS-06 (97.7 %) and JS5 (97.4 %). The results of phylogenetic analysis indicated that strain YJ09 formed a distinct phyletic line in the genus and the results of DNA-DNA relatedness studies demonstrated that strain YJ09 could be separated from its closest relatives in the genus . The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, unidentified glycolipids, an unidentified phospholipid and sphingoglycolipid. The predominant ubiquinone and polyamine components were Q-10 and spermidine, respectively. The major fatty acids were C ω7 C  and C ω7 and/or iso-C 2-OH. The DNA G+C content of this novel isolate was 65.9 mol%. On the basis of phenotypic, chemotaxonomic properties and phylogenetic analyses in this study, strain YJ09 is considered to represent a novel species in the genus , for which the name sp. nov. is proposed. The type strain is YJ09 (=KACC 19551=NBRC 113247).

Download full-text PDF

Source
http://dx.doi.org/10.1099/ijsem.0.004257DOI Listing

Publication Analysis

Top Keywords

strain yj09
28
isolated spinach
8
spinach farming
8
farming field
8
field soil
8
strain
7
yj09
7
nov isolated
4
soil gram-stain-negative
4
gram-stain-negative bacterium
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!