Modeling the temporal network dynamics of neuronal cultures.

PLoS Comput Biol

Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, California, United States of America.

Published: May 2020

Neurons form complex networks that evolve over multiple time scales. In order to thoroughly characterize these networks, time dependencies must be explicitly modeled. Here, we present a statistical model that captures both the underlying structural and temporal dynamics of neuronal networks. Our model combines the class of Stochastic Block Models for community formation with Gaussian processes to model changes in the community structure as a smooth function of time. We validate our model on synthetic data and demonstrate its utility on three different studies using in vitro cultures of dissociated neurons.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7274455PMC
http://dx.doi.org/10.1371/journal.pcbi.1007834DOI Listing

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