Roles of the clip domains of two protease zymogens in the coagulation cascade in horseshoe crabs.

J Biol Chem

Graduate School of Systems Life Sciences, Kyushu University, Fukuoka, Japan; Department of Biology, Faculty of Science, Kyushu University, Fukuoka, Japan. Electronic address:

Published: June 2020

The lipopolysaccharide (LPS)-triggered coagulation cascade in horseshoe crabs comprises three protease zymogens: prochelicerase C (proC), prochelicerase B (proB), and the proclotting enzyme (proCE). The presence of LPS results in autocatalytic activation of proC to α-chelicerase C, which, in turn, activates proB to chelicerase B, converting proCE to the clotting enzyme (CE). ProB and proCE contain an N-terminal clip domain, but the roles of these domains in this coagulation cascade remain unknown. Here, using recombinant proteins and kinetics and binding assays, we found that five basic residues in the clip domain of proB are required to maintain its LPS-binding activity and activation by α-chelicerase C. Moreover, an amino acid substitution at a potential hydrophobic cavity in proB's clip domain (V55A-proB) reduced both its LPS-binding activity and activation rate. WT proCE exhibited no LPS-binding activity, and the WT chelicerase B-mediated activation of a proCE variant with a substitution at a potential hydrophobic cavity (V53A-proCE) was ∼4-fold slower than that of WT proCE. The / value of the interaction of WT chelicerase B with V53A-proCE was 7-fold lower than that of the WT chelicerase B-WT proCE interaction. The enzymatic activities of V55A-chelicerase B and V53A-CE against specific peptide substrates were indistinguishable from those of the corresponding WT proteases. In conclusion, the clip domain of proB recruits it to a reaction center composed of α-chelicerase C and LPS, where α-chelicerase C is ready to activate proB, leading to chelicerase B-mediated activation of proCE via its clip domain.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7324516PMC
http://dx.doi.org/10.1074/jbc.RA119.012452DOI Listing

Publication Analysis

Top Keywords

clip domain
20
coagulation cascade
12
lps-binding activity
12
protease zymogens
8
cascade horseshoe
8
horseshoe crabs
8
proce
8
domain prob
8
activity activation
8
substitution potential
8

Similar Publications

Prompt learning is a powerful technique that enables the transfer of Vision-Language Models (VLMs) like CLIP to downstream tasks. However, when the prompt-based methods are fine-tuned solely on base classes, they often struggle to generalize to novel classes lacking visual samples during training, especially in scenarios with limited training data. To address this challenge, we propose an innovative approach called Synth-CLIP that leverages synthetic data to enhance CLIP's generalization capability for base classes and the general capability for novel classes.

View Article and Find Full Text PDF

Background And Objective: Cerebral aneurysms occur as balloon-like outpouchings in an artery, which commonly develop at the weak curved regions and bifurcations. When aneurysms are detected, understanding the risk of rupture is of immense clinical value for better patient management. Towards this, Fluid-Structure Interaction (FSI) studies can improve our understanding of the mechanics behind aneurysm initiation, progression, and rupture.

View Article and Find Full Text PDF

Voice Handicap Index-Throat: Translation and Cross-Cultural Adaptation to the Arabic Language.

J Voice

December 2024

Department of Medical and Surgical Specialties, Radiological Sciences, and Public Health, Università degli Studi di Brescia, Brescia, Italy; Unit of Otorhinolaryngology, Head and Neck Surgery, Azienda Socio Sanitaria Territoriale Spedali Civili Di Brescia, Brescia, Italy.

Objectives: This study aims to validate and assess the reliability of the Arabic version of the Voice Handicap Index-Throat (VHI-T), as a self-reported questionnaire for patients with throat difficulties.

Study Design: A prospective, observational, cross-sectional, and descriptive study was performed in the ear, nose, and throat department of Kafr El-Sheikh University hospitals from October 2023 to July 2024.

Methods: The preliminary VHI-T was obtained through forward and backward translation.

View Article and Find Full Text PDF

In percutaneous pelvic trauma surgery, accurate placement of Kirschner wires (K-wires) is crucial to ensure effective fracture fixation and avoid complications due to breaching the cortical bone along an unsuitable trajectory. Surgical navigation via mixed reality (MR) can help achieve precise wire placement in a low-profile form factor. Current approaches in this domain are as yet unsuitable for real-world deployment because they fall short of guaranteeing accurate visual feedback due to uncontrolled bending of the wire.

View Article and Find Full Text PDF

Proteins govern most biological functions essential for life, and achieving controllable protein editing has made great advances in probing natural systems, creating therapeutic conjugates, and generating novel protein constructs. Recently, machine learning-assisted protein editing (MLPE) has shown promise in accelerating optimization cycles and reducing experimental workloads. However, current methods struggle with the vast combinatorial space of potential protein edits and cannot explicitly conduct protein editing using biotext instructions, limiting their interactivity with human feedback.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!