-internal tandem duplication (-ITD) is a key predictive factor for the prognosis of acute myeloid leukemia (AML). We compared the detection sensitivity of fragment analysis with that of PCR-electrophoresis using MV4-11 (-ITD) and NKM-1 (-wild type) cell lines. DNA of these cells was mixed at different ratios and subjected to PCR-electrophoresis or fragment analysis. PCR-electrophoresis was found to have an -ITD allelic ratio (AR) detection limit of 0.034-0.072. Visual inspection of the PCR-electrophoresis revealed a lower detection sensitivity than that of fragment analysis. Therefore, it is essential to conduct fragment analysis when screening for -ITD.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7184170PMC
http://dx.doi.org/10.1016/j.lrr.2020.100198DOI Listing

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