In plants, 14-3-3 proteins are recognized as mediators of signal transduction and function in both development and stress response. However, there are only a few preliminary functional researches in the C4 crop foxtail millet. Here, phylogenetic analysis categorized foxtail millet 14-3-3s (SiGRFs) into 10 discrete groups (Clusters I to X). Transcriptome and qPCR analyses showed that all the responded to at least one abiotic stress. All but one overexpressing (OE) line () exhibited insensitivity to abiotic stresses during seed germination and seedling growth. Compared with the Col-0 wild-type, had slightly lower germination rates and smaller leaves. However, flowering time of occurred earlier than that of Col-0 under high-salt stress. Interaction of SiGRF1 with a foxtail millet E3 ubiquitin-protein ligase (SiRNF1/2) indicates that the proteinase system might hydrolyze SiGRF1. Further investigation showed that SiGRF1 localized in the cytoplasm, and its gene was ubiquitously expressed in various tissues throughout various developmental stages. Additionally, flowering-related genes, , , , and , in exhibited considerably higher expression levels than those in Col-0 under salinity-stressed conditions. Results suggest that hastens flowering, thereby providing a means for foxtail millet to complete its life cycle and avoid further salt stress.
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http://dx.doi.org/10.3389/fpls.2020.00449 | DOI Listing |
Theor Appl Genet
January 2025
College of Agriculture, State Key Laboratory of Crop Stress Biology in Arid Areas, Northwest A&F University, Yangling, 712100, China.
QTL mapping of two RIL populations in multiple environments revealed a consistent QTL for bristle length, and combined with RNA-seq, a potential candidate gene influencing bristle length was identified. Foxtail millet bristles play a vital role in increasing yields and preventing bird damage. However, there is currently limited research on the molecular regulatory mechanisms underlying foxtail millet bristle formation, which constrains the genetic improvement and breeding of new foxtail millet varieties.
View Article and Find Full Text PDFBMC Genomics
January 2025
Maize Research Institute, Sichuan Agricultural University, Wenjiang, 611130, Sichuan, China.
Background: Conserved non-coding sequences (CNS) are islands of non-coding sequences conserved across species and play an important role in regulating the spatiotemporal expression of genes. Identification of CNS provides valuable information about potentially functional genomic elements, regulatory regions, and helps to gain insights into the genetic basis of crop agronomic traits.
Results: Here, we comprehensively analyze CNS in maize, by comparing the genomes of maize inbred line B73 (Zea mays ssp.
Food Chem
January 2025
College of Food Science and Engineering, Ocean University of China, Qingdao 266003, China. Electronic address:
The influence of foxtail millet bran polysaccharides (MPs) on millet starch (MS) digestion was investigated in the three aspects (MPs, MP-MS gel properties, the interactions between MPs and MS). The results showed that MPs with a higher Mw (58-2552 kDa), a narrower Mw distribution (1.85-9.
View Article and Find Full Text PDFPlant Genome
March 2025
School of Biological and Behavioural Sciences, Queen Mary University of London, London, E1 4NS, UK.
Repetitive DNA contributes significantly to plant genome size, adaptation, and evolution. However, little is understood about the transcription of repeats. This is addressed here in the plant green foxtail millet (Setaria viridis).
View Article and Find Full Text PDFJ Exp Bot
January 2025
Noble Research Institute, Ardmore, OK 73401, USA.
Translating biological knowledge from Arabidopsis to crop species is important to advance agriculture and secure food production in the face of dwindling fertilizer resources and biotic and abiotic stresses. However, it is often not trivial to identify functional homologs (orthologs) of Arabidopsis genes in crops. Combining sequence and expression data can improve the correct prediction of orthologs.
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