Dietary phenolic compounds are often transformed by gut microbiota prior to absorption. This transformation may modify their structures, producing novel gut flora metabolites associated with numerous health benefits. Traditional mass spectrometry (MS) based approaches for assessing dietary exposure of cocotea (cocoa, coffee and tea) products provided very little information about the modification and fate of dietary phenolics after ingestion, mainly due to limitation of complex sample nature and their data analyses. Mass spectrometry techniques are well-suited to a high-throughput characterization of natural products, however, analyzing MS based data of complex biological matrix is still considered a challenge. In order to overcome such limitations and simplify the analysis of complex MS data, a cocotea based human trial was conducted where MS based molecular networking approach was implemented. To demonstrate the utility of this approach in one of the specific cocotea diets, we have applied it to a diverse collection of human (n = 15) urine samples, who consumed cocoa rich in polyphenols over a 48-h period. This approach illustrated the power of the new strategy, allowing the rapid identification of new analogues of cocoa metabolites after human consumption. Analysis of human urine samples after cocoa consumption revealed (by assignment of unknown metabolites based on the network similarities) that monomeric flavanols are mainly absorbed and transformed directly into their glucuronide and sulfated moieties. Subsequently, the hydroxy and methoxy phenyl-g-velerolactone as well as their smaller metabolites (such as hydroxyphenyl valeric acids, hydroxy and methoxy phenyl propionic acids and their derivates) are indicative of bacterial metabolism of cocoa major flavanols. For the first time, our study exemplifies and highlight the implementation of MS based molecular networking approach in illustrating the tracking of various structural motifs of ingested cocoa phenolics in human based study.
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http://dx.doi.org/10.1016/j.foodres.2020.109119 | DOI Listing |
Am J Trop Med Hyg
January 2025
Department of Microbiology, Korea University College of Medicine, Seoul, Republic of Korea.
The phylogeographic inference approach aims to connect genomic data with epidemiology to understand the spread and evolution of pathogens using visualization of spatiotemporal reconstructions. Orthohantavirus hantanense (HTNV), the causative agent of hemorrhagic fever with renal syndrome (HFRS), represents a significant global public health concern. Here, we introduce a localized Nextstrain platform for HTNV, offering a comprehensive resource for facilitating spatiotemporal genomic surveillance and the study of evolutionary dynamics of viral genomes.
View Article and Find Full Text PDFACS Appl Mater Interfaces
January 2025
Colour Science and Textile Chemistry Research Center, College of Textiles and Clothing, Qingdao University, Qingdao, Shandong 266071, China.
Superhydrophobic fabrics suffer from being commonly penetrated by moisture after laundering, seriously deteriorating their water repellency after air drying. Numerous researchers have successfully recovered superhydrophobicity by drying in fluid ovens; however, high energy consumption and equipment dependence limit practical applications. Herein, the superhydrophobic photothermal self-healing cotton fabric (SPS cotton fabric) was fabricated by depositing a composite layer of cellulose nanocrystal-MXene (C-MXene) and polyacrylate (PA) coatings on the cotton cloth.
View Article and Find Full Text PDFThyroid
January 2025
Division of Endocrinology, Diabetes and Metabolism, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
In the era of molecular testing, thyroid nodules with indeterminate cytology are increasingly being managed nonoperatively. The false-negative rates of these molecular tests, and therefore missed malignancies, are not well defined in real-world clinical practice. This retrospective study of patients undergoing fine needle aspiration (FNA) biopsy at our health system between November 2017 and March 2022 included nodules with The Bethesda System for Reporting Thyroid Cytopathology (TBSRTC) III and IV cytology and negative, currently negative, or negative but limited ThyroSeq version 3 (TSv3) results.
View Article and Find Full Text PDFJ Chem Inf Model
January 2025
Geneis (Beijing) Co. Ltd., Beijing 100102, China.
Identification of potential drug-target interactions (DTIs) is a crucial step in drug discovery and repurposing. Although deep learning effectively deciphers DTIs, most deep learning-based methods represent drug features from only a single perspective. Moreover, the fusion method of drug and protein features needs further refinement.
View Article and Find Full Text PDFSci Signal
January 2025
Centro de Biología Molecular Severo Ochoa, Consejo Superior de Investigaciones Científicas, Universidad Autónoma de Madrid, 28049 Madrid, Spain.
The small GTPase R-RAS2 regulates homeostatic proliferation and survival of T and B lymphocytes and, when present in high amounts, drives the development of B cell chronic lymphocytic leukemia. In normal and leukemic lymphocytes, R-RAS2 constitutively binds to antigen receptors through their immunoreceptor tyrosine-based activation motifs (ITAMs) and promotes tonic activation of the phosphatidylinositol 3-kinase (PI3K) signaling pathway. Here, we examined the molecular mechanisms underlying this direct interaction and its consequences for R-RAS2 activity.
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