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Complete genome sequence of Bacillus sp. N1-1, a κ-selenocarrageenan degrading bacterium isolated from the cold seep in the South China Sea. | LitMetric

Complete genome sequence of Bacillus sp. N1-1, a κ-selenocarrageenan degrading bacterium isolated from the cold seep in the South China Sea.

Mar Genomics

The First Institute of Oceanography, Ministry of Natural Resources, Qingdao 266061, China; Laboratory for Marine Drugs and Bioproducts of Qingdao National Laboratory for Marine Science and Technology, Qingdao 266071, China. Electronic address:

Published: December 2020

κ-Selenocarrageenan is made from natural κ-carrageenan, in which Se partially replaces Sulfur (S). The underlying mechanism of κ-selenocarrageenan degradation remain unreported so far. Here, we describe the complete genome of a cold seep bacterium, Bacillus sp. N1-1, which can degrade κ-selenocarrageenan. The strain has a circular genome of 4,497,340 bp and 40.48 mol% G + C content, consisting of 4272 protein-coding sequences (CDSs), 87 tRNAs, as well as 28 rRNA operons as 5S-16S-23S rRNA. N1-1 genome contains several protein-coding genes relating to polysaccharide degradation and the potential of this bacterium to produce enzymes for the hydrolysis of κ-selenocarrageenan on the basis of complete genome analysis could be discovered.

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Source
http://dx.doi.org/10.1016/j.margen.2020.100771DOI Listing

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