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Genome-Wide Identification and Analysis on YUCCA Gene Family in Fort. and Functional Exploration. | LitMetric

Genome-Wide Identification and Analysis on YUCCA Gene Family in Fort. and Functional Exploration.

Int J Mol Sci

National Engineering Laboratory for Resources Development of Endangered Crude Drugs in Northwest China, The Key Laboratory of Medicinal Resources and Natural Pharmaceutical Chemistry, The Ministry of Education, College of Life Sciences, Shaanxi Normal University, Xi'an 710119, China.

Published: March 2020

Auxin is one of the most critical hormones in plants. YUCCA (Tryptophan aminotransferase of (TAA)/YUCCA) enzymes catalyze the key rate-limiting step of the tryptophan-dependent auxin biosynthesis pathway, from IPA (Indole-3-pyruvateacid) to IAA (Indole-3-acetic acid). Here, 13 YUCCA family genes were identified from , which were divided into four categories, distributing randomly on chromosomes (2 = 14). The typical and conservative motifs, including the flavin adenine dinucleotide (FAD)-binding motif and flavin-containing monooxygenases (FMO)-identifying sequence, existed in the gene structures. genes were expressed differently in different organs (roots, stems, leaves, buds, flowers, and siliques) and developmental periods (7, 21, 60, and 150 days after germination). Taking as an example, the genes functions were discussed. The results showed that was sensitive to PEG (polyethylene glycol), cold, wounding, and NaCl treatments. The over-expressed tobacco plants exhibited high auxin performances, and some early auxin response genes , and ) were upregulated with increased IAA content. In the dark, the contents of total chlorophyll and hydrogen peroxide in the transgenic lines were significantly lower than in the control group, with downregulated and some delayed leaf senescence characteristics, which delayed the senescence process to a certain extent. The findings provide comprehensive insight into the phylogenetic relationships, chromosomal distributions, and expression patterns and functions of the YUCCA gene family in .

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7139497PMC
http://dx.doi.org/10.3390/ijms21062188DOI Listing

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