The present study aimed to determine the taxonomic positions of strains designated R-5-52-3, R-5-33-5-1-2, R-5-48-2 and R-5-51-4 isolated from hot spring water samples. Cells of these strains were Gram-stain-negative, non-motile and rod-shaped. The strains shared highest 16S rRNA gene sequence similarity with KCTC 32020 (95.1%). Growth occurred at 28-55 °C, at pH 6-8 and with up to 3 % (w/v) NaCl. DNA fingerprinting, biochemical, phylogenetic and 16S rRNA gene sequence analyses suggested that R-5-52-3, R-5-33-5-1-2, R-5-48-2 and R-5-51-4 were different strains but belonged to the same species. Hence, R-5-52-3 was chosen for further analysis and R-5-33-5-1-2, R-5-48-2 and R-5-51-4 were considered as additional strains of this species. R-5-52-3 possessed Q-8 as the only quinone and iso-C, iso-C, C and iso-C as major fatty acids. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, unidentified polar lipids and two unidentified phospholipids. The genomic G+C content was 71.6 mol%. Heat shock proteins (e.g. Hsp20, GroEL, DnaK and Clp ATPases) were noted in the R-5-52-3 genome, which could suggest its protection in the hot spring environment. Pan-genome analysis showed the number of singleton gene clusters among members varied. Average nucleotide identity (ANI) values between R-5-52-3, YIM 77520 and KCTC 32020 were 80.1-85.8 %, which were below the cut-off level (95-96 %) recommended as the ANI criterion for interspecies identity. Thus, based on the above results, strain R-5-52-3 represents a novel species of the genus , for which the name sp. nov. is proposed. The type strain is R-5-52-3 (=KCTC 72061=CGMCC 1.16678).
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1099/ijsem.0.003934 | DOI Listing |
Sci Rep
January 2025
Climate and Environmental Institute, Korea Institute of Science and Technology, Hwarangno 14-gil 5, Seongbuk-gu, Seoul, 02792, Republic of Korea.
Abiotic H and hydrocarbons are found in fluids discharged from ultramafic-hosted hydrothermal vents. Beneath the hydrothermal vents, abiotic H and hydrocarbons can be formed by serpentinization reactions and Fischer-Tropsch-type hydrocarbon-forming reactions, respectively, over ultramafic rocks. However, the source rocks that form abiotic H and hydrocarbons may extend to broader subsurface rocks.
View Article and Find Full Text PDFSci Rep
January 2025
INES Integrated Environmental Solutions UG, Wilhelmshaven, Germany.
Hydrothermal vents are ecosystems inhabited by a highly specialized fauna. To date, more than 30 gastropod species have been recorded from vent fields along the Central and Southeast Indian Ridge and all of them are assumed to be vent-endemic. During the INDEX project, 701 representatives of the genus Anatoma (Mollusca: Vetigastropoda) were sampled from six abyssal hydrothermal vent fields.
View Article and Find Full Text PDFPlants (Basel)
December 2024
Laboratory of Plant Pathology and Bioproducts, Faculty of Agronomic Sciences, University of Tarapacá, Av. General Velásquez 1775, Arica 1000000, Chile.
The region of Arica and Parinacota hosts unexplored remote sites with unique characteristics suitable for developing novel agricultural bioproducts. Notable locations include Jurasi Hot Springs, Polloquere Hot Springs, and Amuyo Lagoons, featuring open pools fed by thermal mountain springs. These geothermal sites harbor bacteria with plant growth-promoting activities, particularly interesting to the strains J19, TP22, A20, and A3.
View Article and Find Full Text PDFWorld J Microbiol Biotechnol
January 2025
Department of Bioengineering, Faculty of Engineering and Natural Sciences, Istanbul Medeniyet University, Istanbul, 34700, Turkey.
Thermomonas hydrothermalis, a thermophilic bacterium isolated from hot springs, exhibits unique genomic features that underpin its adaptability to extreme environments and its potential in industrial biotechnology. In this study, we present a comparative genomic analysis of two strains, DSM 14834 and HOT.CON.
View Article and Find Full Text PDFJ Agric Food Chem
January 2025
Department of Plant Breeding, Swedish University of Agricultural Sciences, Box 190, Lomma SE-23422, Sweden.
In this study, the impact of the varying environments, wet-cool (2017), dry-hot (2018), and fluctuating (2019), on two spring wheat genotypes, Diskett and Bumble, grown in field conditions in southern Sweden was studied. From harvested grains, polymeric gluten proteins were fractionated and collected using SE-HPLC and then analyzed with LC-MS/MS. Proteins and peptides identified through searches against the protein sequences of (taxon 4565) from the UniProtKB database showed 7 high molecular weight glutenin subunits (HMW-GS) and 24 low molecular weight glutenin subunits (LMW-GS) with different enrichment levels for both genotypes.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!