A PHP Error was encountered

Severity: Warning

Message: file_get_contents(https://...@pubfacts.com&api_key=b8daa3ad693db53b1410957c26c9a51b4908&a=1): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests

Filename: helpers/my_audit_helper.php

Line Number: 176

Backtrace:

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 176
Function: file_get_contents

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 250
Function: simplexml_load_file_from_url

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3122
Function: getPubMedXML

File: /var/www/html/application/controllers/Detail.php
Line: 575
Function: pubMedSearch_Global

File: /var/www/html/application/controllers/Detail.php
Line: 489
Function: pubMedGetRelatedKeyword

File: /var/www/html/index.php
Line: 316
Function: require_once

Regulation of Leishmania major PAS domain-containing phosphoglycerate kinase by cofactor Mg ion at neutral pH. | LitMetric

AI Article Synopsis

  • Recent studies on LmPAS-PGK, a phosphoglycerate kinase from Leishmania major, indicate that its activity is optimal at acidic pH (5.5) and likely regulated by its PAS domain.
  • Experiments using various enzyme variants showed that binding of magnesium (Mg) through the PAS domain inhibits PGK activity at neutral pH (7.5), but this inhibition is lifted at acidic pH.
  • Mutational analysis identified His-57 as a key residue for Mg binding, where its protonated form at pH 5.5 weakens Mg's binding, allowing the enzyme to activate and produce more ATP.

Article Abstract

Recently, we described the PAS domain-containing phosphoglycerate kinase (PGK) from Leishmania major (LmPAS-PGK) that shows acidic pH (5.5)-dependent optimum catalytic activity. The PAS domain of LmPAS-PGK is expected to regulate PGK activity during catalysis, but the mechanism of regulation by PAS domain at the molecular level is uncharacterized. In this work, we have utilized the full-length, PAS domain-deleted, and mutant enzymes to measure the enzymatic activity in the presence of divalent cation at various pH values. Catalytic activity measurement indicates that Mg binding through PAS domain inhibits the PGK activity at pH 7.5, and this inhibition is withdrawn at pH 5.5. To identify the Mg binding residues of the PAS domain, we exploited a systematic mutational analysis of all (four) His residues in the PAS domain for potential divalent cation binding. Replacement of His-57 with alanine resulted in depression in the presence of Mg at pH 7.5, but H71A, H89A, and H111A showed similar characteristics with respect to the wild-type protein. Fluorescence and isothermal titration calorimetry studies revealed that H57 is responsible for Mg binding in the absence of substrates. Thus, the protonated form of His57 at acidic pH 5.5 destabilizes the Mg binding in the PAS domain, which is an essential requirement in the wild-type LmPAS-PGK for a conformational alteration in the sensor domain that, sequentially, activates the PGK domain, resulting in the synthesis of higher amounts of ATP.

Download full-text PDF

Source
http://dx.doi.org/10.1111/febs.15305DOI Listing

Publication Analysis

Top Keywords

pas domain
24
pas
9
pas domain-containing
8
domain-containing phosphoglycerate
8
phosphoglycerate kinase
8
catalytic activity
8
domain
8
pgk activity
8
divalent cation
8
binding pas
8

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!