AI Article Synopsis

  • Scientists are studying brain problems called arteriovenous malformations (bAVM), but it's hard to understand because they’re rare in families, and most cases happen by chance.
  • They did genetic tests on a young boy with bAVM and found 20 important gene changes, some he inherited and one that completely stopped a gene from working.
  • The researchers used special computer tools to look at how these gene changes might be linked to bAVM, suggesting these changes could help explain how the condition develops and should be studied more.

Article Abstract

Molecular signaling that leads to brain arteriovenous malformation (bAVM) is to date elusive and this is firstly due to the low frequency of familial cases. Conversely, sporadic bAVM is the most diffuse condition and represents the main source to characterize the genetic basis of the disease. Several studies were conducted in order to detect both germ-line and somatic mutations linked to bAVM development and, in this context, next generation sequencing technologies offer a pivotal resource for the amount of outputted information. We performed whole exome sequencing on a young boy affected by sporadic bAVM. Paired-end sequencing was conducted on an Illumina platform and filtered variants were validated by Sanger sequencing. We detected 20 likely gene-disrupting variants affecting as many loci. Of these variants, 11 are inherited novel variants and one is a nonsense variant, affecting gene. Moreover, we also considered rare known variants affecting loci involved in vascular differentiation. In order to explain their possible involvement in bAVM pathogenesis, we analyzed molecular networks at Cytoscape platform. In this study we focus on some genetic point variations detected in a child affected by bAVM. Therefore, we suggest these novel affected loci as prioritized for further investigation on pathogenesis of bAVM lesions.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7059193PMC
http://dx.doi.org/10.3389/fgene.2020.00146DOI Listing

Publication Analysis

Top Keywords

gene-disrupting variants
8
brain arteriovenous
8
sporadic bavm
8
variants loci
8
bavm
7
variants
6
high-throughput sequencing
4
sequencing detect
4
detect novel
4
novel gene-disrupting
4

Similar Publications

Association between rare, genetic variants linked to autism and ultrasonography fetal anomalies in children with autism spectrum disorder.

J Neurodev Disord

September 2024

Department of Epidemiology, Biostatistics and Community Health Sciences, Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.

Article Synopsis
  • Recent research indicates a potential link between certain fetal anomalies identified during prenatal ultrasounds and the occurrence of autism spectrum disorder (ASD) in children.
  • The study analyzed data from 126 children with ASD, finding that 34.1% had prenatal ultrasound anomalies, with specific genetic variants (like loss-of-function mutations) being more prevalent among these children.
  • The findings suggest that rare genetic mutations associated with these ultrasound anomalies may play a role in ASD susceptibility, indicating a significant correlation between genetic risk factors and fetal development issues.
View Article and Find Full Text PDF

Comparison of three bioinformatics tools in the detection of ASD candidate variants from whole exome sequencing data.

Sci Rep

November 2023

Department of Epidemiology, Biostatistics, and Health Community Sciences, Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.

Autism spectrum disorder (ASD) is a heterogenous multifactorial neurodevelopmental condition with a significant genetic susceptibility component. Thus, identifying genetic variations associated with ASD is a complex task. Whole-exome sequencing (WES) is an effective approach for detecting extremely rare protein-coding single-nucleotide variants (SNVs) and short insertions/deletions (INDELs).

View Article and Find Full Text PDF

Background: HIST1H1E is a member of the H1 gene family. Excess de novo likely gene-disruptive variants involving the C-terminal tail of HIST1H1E have been reported in neurodevelopmental disorders. Although clinical phenotypes in some patients have been described in single studies, few studies have reviewed the genotype and phenotype relationships using a relatively large cohort of patients with HIST1H1E variants.

View Article and Find Full Text PDF

Elucidating the clinical and molecular spectrum of SMARCC2-associated NDD in a cohort of 65 affected individuals.

Genet Med

November 2023

Institute of Human Genetics, Universitätsklinikum Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany; Centre for Rare Diseases Erlangen (ZSEER), Erlangen, Germany. Electronic address:

Purpose: Coffin-Siris and Nicolaides-Baraitser syndromes are recognizable neurodevelopmental disorders caused by germline variants in BAF complex subunits. The SMARCC2 BAFopathy was recently reported. Herein, we present clinical and molecular data on a large cohort.

View Article and Find Full Text PDF
Article Synopsis
  • Likely gene-disrupting variants in the DYRK1A gene cause DYRK1A syndrome, which is linked to autism spectrum disorder (ASD) and intellectual disability (ID).
  • A study compared 29 individuals with DYRK1A syndrome to other children with ASD, assessing their social communication and behaviors with confirmed diagnostic tools.
  • Results indicated that those with DYRK1A syndrome exhibit similar social communication traits as individuals with idiopathic ASD, along with specific challenges and high rates of sensory-seeking behaviors, highlighting potential genetic predictors for ASD traits.
View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!