The availability of (co)variance components and genetics parameter estimates for traits included in a selection program is crucial since the estimated breeding values of the selected traits are computed based on the available (co)variance components and genetics parameters. The present study aimed to estimate (co)variance components and genetics parameters for linear traits related to foot/leg and udder (i.e. rear legs set, foot angle, udder depth, and teat length) in Holstein cattle in Indonesia. Linear traits were measured (instead of scored) on 310 lactating Holstein cows raised in the National Breeding Centre for Dairy Cattle and Forage of Indonesia (BBPTUHPT Baturraden). These were nearly all cows in lactation owned by the centre at the time of study. Lactating cows which were not measured during study were those which are technically difficult to handle. The Average Information Restricted Maximum Likelihood (AI-REML) method of the DMU program was used to estimate the (co)variances and genetics parameters of the considered linear traits. A four-multivariate animal model was employed by including farm (fixed), animal (random), and age (covariate) effects in the model of analysis. The phenotypic means (standard deviation) for rear legs set, foot angle, udder depth, and teat length were 139.70 (6.03), 50.65 (5.04), 10.67 (6.19), and 5.27 (0.96), respectively. The results showed that the estimated heritability ( ) was 0.334, 0.236, 0.147, and 0.213 for rear legs set, foot angle, udder depth, and teat length, respectively. The genetic (phenotypic) correlations between linear traits rear legs set-foot angle, rear legs set-udder depth, rear legs set-teat length, foot angle-udder depth, foot angle-teat length, and udder depth-teat length were ( ), (0.002), 0.101 (0.036), 0.002 ( ), ( ), and (0.019), respectively. The present study concluded that the linear traits could be used in the selection program, though the traits should be properly weighted to avoid deteriorating selection response.
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http://dx.doi.org/10.5194/aab-61-491-2018 | DOI Listing |
Geroscience
January 2025
The Jackson Laboratory, Bar Harbor, ME, USA.
Analysis of preclinical lifespan studies often assume that outcome data from co-housed animals are independent. In practice, treatments, such as controlled feeding or putative life-extending compounds, are applied to whole housing units, and as a result, the outcomes are potentially correlated within housing units. We consider intra-class (here, intra-cage) correlation in three published and two unpublished lifespan studies of aged mice encompassing more than 20,000 observations.
View Article and Find Full Text PDFEnviron Health Prev Med
January 2025
Department of Public Health, School of Medicine, International University of Health and Welfare.
Background: High levels of attention-deficit/hyperactivity disorder (ADHD) traits are associated with various outcomes, including depressive symptoms, functional impairment, and low self-esteem. Additionally, individuals with high levels of ADHD traits are reported to be more adversely affected by fear of coronavirus disease 2019 (COVID-19). The current study aimed to examine whether the association between ADHD traits and outcomes was partially mediated by fear of COVID-19 using mediation analysis.
View Article and Find Full Text PDFJ Genet Genomics
January 2025
Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA. Electronic address:
The QTL by environment interaction (Q×E) effect is hard to detect because there are no effective ways to control the genomic background. In this study, we propose a novel linear mixed model that simultaneously analyzes data from multiple environments to detect Q×E interactions. This model incorporates two different kinship matrices derived from the genome-wide markers to control both main and interaction polygenic background effects.
View Article and Find Full Text PDFHortic Res
January 2025
UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France.
Flowering date in perennial fruit trees is an important trait for fruit production. Depending on the winter and spring temperatures, flowering of olive may be advanced, delayed, or even suppressed. Deciphering the genetic control of flowering date is thus key to help selecting cultivars better adapted to the current climate context.
View Article and Find Full Text PDFTransl Anim Sci
December 2024
Department of Agricultural and Environmental Sciences, College of Agriculture, Environment and Nutrition Sciences, Tuskegee University, Tuskegee, AL 36088, USA.
Hempseed meal (HSM) is a potential alternative feedstuff for livestock due to its high protein content, but it has not been approved for animal feed in the United States due to safety concerns. This study was conducted to determine the effects of HSM on feed intake, growth performance, serum biochemistry, ruminal papillae morphology, ruminal fermentation profiles, and carcass characteristics of intact male goats. Thirty-six Boer × Spanish intact male goats were randomly assigned to one of four experimental diets ( = 9 goats/diet): 0%, 10%, 20%, and 30% HSM on as-fed basis.
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