Crystal structures and Hirshfeld surface analyses of two new tetra-kis-substituted pyrazines and a degredation product.

Acta Crystallogr E Crystallogr Commun

Institute of Physics, University of Neuchâtel, rue Emile-Argand 11, CH-2000 Neuchâtel, Switzerland.

Published: March 2020

AI Article Synopsis

  • Two new types of tetra-kis-substituted pyrazines (I and II) were identified, both showing half a molecule in the asymmetric unit and exhibiting weak intra-molecular hydrogen bonds.
  • The degradation product (III) features a nearly coplanar 6-phenyl structure with the pyrrolo-pyrazine unit and also showcases weak hydrogen bonds involving both pyrazine and aniline groups.
  • In the crystals, the molecules in (I) lack significant inter-molecular interactions, while (II) and (III) exhibit chain-like and ribbon-like structures, respectively, due to various types of C-H⋯π interactions.

Article Abstract

The two new tetra-kis-substituted pyrazines, 1,1',1'',1'''-(pyrazine-2,3,5,6-tetra-yl) tetra-kis-(,-di-methyl-methanamine), CHN, (I) and ,','','''-[pyrazine-2,3,5,6-tetra-yltetra-kis-(methyl-ene)]tetra-kis-(-methyl-aniline), CHN, (II), both crystallize with half a mol-ecule in the asymmetric unit; the whole mol-ecules are generated by inversion symmetry. There are weak intra-molecular C-H⋯N hydrogen bonds present in both mol-ecules and in (II) the pendant -methyl-aniline rings are linked by a C-H⋯π inter-action. The degredation product, ,[(6-phenyl-6,7-di-hydro-5-pyrrolo-[3,4-]pyrazine-2,3-di-yl)bis(methyl-ene)]bis-(-methyl-aniline), CHN, (III), was obtained several times by reacting (II) with different metal salts. Here, the 6-phenyl ring is almost coplanar with the planar pyrrolo-[3,4-]pyrazine unit (r.m.s. deviation = 0.029 Å), with a dihedral angle of 4.41 (10)° between them. The two -meth-yl-aniline rings are inclined to the planar pyrrolo-[3,4-]pyrazine unit by 88.26 (10) and 89.71 (10)°, and to each other by 72.56 (13)°. There are also weak intra-molecular C-H⋯N hydrogen bonds present involving the pyrazine ring and the two -methyl-aniline groups. In the crystal of (I), there are no significant inter-molecular contacts present, while in (II) mol-ecules are linked by a pair of C-H⋯π inter-actions, forming chains along the -axis direction. In the crystal of (III), mol-ecules are linked by two pairs of C-H⋯π inter-actions, forming inversion dimers, which in turn are linked by offset π-π inter-actions [inter-centroid distance = 3.8492 (19) Å], forming ribbons along the -axis direction.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7057384PMC
http://dx.doi.org/10.1107/S2056989020002133DOI Listing

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Article Synopsis
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