Stereochemistry-Controlled Supramolecular Architectures of New Tetrahydroxy-Functionalised Amphiphilic Carbocyanine Dyes.

Chemistry

Forschungszentrum für Elektronenmikroskopie und Gerätezentrum BioSupraMol, Institut für Chemie und Biochemie, Freie Universität Berlin, Fabeckstraße 36a, 14195, Berlin, Germany.

Published: May 2020

AI Article Synopsis

  • Researchers developed new amphiphilic dye derivatives that vary by stereochemistry (chiral forms and meso form).
  • The new synthetic method created asymmetrical cyanine dyes, all of which formed J aggregates in water.
  • Various microscopy techniques showed that the aggregates' structures (sheet-like, nanotubes, needle-like) are influenced by the stereochemistry of the head groups, affecting aggregation behavior and hydrogen bonding.

Article Abstract

The syntheses of novel amphiphilic 5,5',6,6'-tetrachlorobenzimidacarbocyanine (TBC) dye derivatives with aminopropanediol head groups, which only differ in stereochemistry (chiral enantiomers, meso form and conformer), are reported. For the achiral meso form, a new synthetic route towards asymmetric cyanine dyes was established. All compounds form J aggregates in water, the optical properties of which were characterised by means of spectroscopic methods. The supramolecular structure of the aggregates is investigated by means of cryo-transmission electron microscopy, cryo-electron tomography and AFM, revealing extended sheet-like aggregates for chiral enantiomers and nanotubes for the mesomer, respectively, whereas the conformer forms predominately needle-like crystals. The experiments demonstrate that the aggregation behaviour of compounds can be controlled solely by head group stereochemistry, which in the case of enantiomers enables the formation of extended hydrogen-bond chains by the hydroxyl functionalities. In case of the achiral meso form, however, such chains turned out to be sterically excluded.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7317399PMC
http://dx.doi.org/10.1002/chem.201905745DOI Listing

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