We study hidden scale invariance in the glassy phase of the Kob-Andersen binary Lennard-Jones system. After cooling below the glass transition, we generate a so-called isomorph from the fluctuations of potential energy and virial in the NVT ensemble: a set of density, temperature pairs for which structure and dynamics are identical when expressed in appropriate reduced units. To access dynamical features, we shear the system using the SLLOD algorithm coupled with Lees-Edwards boundary conditions and study the statistics of stress fluctuations and the particle displacements transverse to the shearing direction. We find good collapse of the statistical data, showing that isomorph theory works well in this regime. The analysis of stress fluctuations, in particular the distribution of stress changes over a given strain interval, allows us to identify a clear signature of avalanche behavior in the form of an exponential tail on the negative side. This feature is also isomorph invariant. The implications of isomorphs for theories of plasticity are discussed briefly.
Download full-text PDF |
Source |
|---|---|
| http://dx.doi.org/10.1103/PhysRevE.100.053005 | DOI Listing |
Publication Analysis
Top Keywords
Similar Publications
Variable stressor exposure shapes fitness within and across generations.
Sci Rep
January 2025
Aquatic Ecology, Department of Biology, Lund University, Lund, Sweden.
Environmental variation has long been considered a key driver of evolutionary change, predicted to shape different strategies, such as genetic specialization, plasticity, or bet-hedging to maintain fitness. However, little evidence is available with regards to how the periodicity of stressors may impact fitness across generations. To address this gap, I conducted a reciprocal split-brood experiment using the freshwater crustacean, Daphnia magna, and an ecologically relevant environmental stressor, ultraviolet radiation (UVR).
View Article and Find Full Text PDFFine-tuning gibberellin improves rice alkali-thermal tolerance and yield.
Nature
January 2025
Shanghai Collaborative Innovation Center of Agri-Seeds, Joint Center for Single Cell Biology, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Soil alkalinization and global warming are predicted to pose major challenges to agriculture in the future, as they continue to accelerate, markedly reducing global arable land and crop yields. Therefore, strategies for future agriculture are needed to further improve globally cultivated, relatively high-yielding Green Revolution varieties (GRVs) derived from the SEMIDWARF 1 (SD1) gene. Here we propose that precise regulation of the phytohormone gibberellin (GA) to optimal levels is the key to not only confer alkali-thermal tolerance to GRVs, but also to further enhance their yield.
View Article and Find Full Text PDFA chromosome-level, haplotype-resolved genome assembly and annotation for the Eurasian minnow (Leuciscidae: Phoxinus phoxinus) provide evidence of haplotype diversity.
Gigascience
January 2025
Leibniz Institute for the Analysis of Biodiversity Change, Museum Koenig Bonn, 53113 Bonn, Germany.
Background: In this study, we present an in-depth analysis of the Eurasian minnow (Phoxinus phoxinus) genome, highlighting its genetic diversity, structural variations, and evolutionary adaptations. We generated an annotated haplotype-phased, chromosome-level genome assembly (2n = 50) by integrating high-fidelity (HiFi) long reads and chromosome conformation capture data (Hi-C).
Results: We achieved a haploid size of 940 megabase pairs (Mbp) for haplome 1 and 929 Mbp for haplome 2 with high scaffold N50 values of 36.
The study of mechanical properties and fracture evolution of coal-rock masses under hard roof-soft floor conditions.
Sci Rep
January 2025
School of Mechanical and Engineering, Liaoning Technical University, Fuxin, 123000, China.
As the depth of coal mining in China continues to increase, the fracturing of coal rock masses has an increasingly complex impact on the surrounding rock roadways. The majority of the mine's roadways run through coal rock masses with hard roofs and soft bottoms, which typically exhibit complex dynamic behaviour. To further research the mechanical behaviour and fracture evolution of coal rock masses under hard-roof and soft-floor conditions, the study is based on the majority of working faces in a mine, which have hard roofs and soft floors.
View Article and Find Full Text PDFDevelopmental and environmental effects on VTC2-dependent leaf ascorbate accumulation and functions.
J Exp Bot
January 2025
Heinrich Heine University Düsseldorf, Universitätsstraße 1, 40225 Düsseldorf, Germany.
In nature, environmental conditions strongly fluctuate, frequently subjecting plants to periods of immediate photo-oxidative stress. The small molecule ascorbate allows plants to cope with such stress conditions. Ascorbate scavenges reactive oxygen species and enables the rapid and full induction of photoprotective non-photochemical quenching (NPQ).
View Article and Find Full Text PDFWant AI Summaries of new PubMed Abstracts delivered to your In-box?
Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!