AI Article Synopsis
- * The researchers examine six different polymer sequences, discovering that three form crystals at low temperatures while the others develop gel-like networks or clusters due to lower charge densities.
- * Notably, only one sequence displays liquid behavior, indicating its reduced likelihood to fold or crystallize, which reflects characteristics seen in real IDPs.
Article Abstract
Motivated by the idea that intrinsically disordered proteins (IDPs) condense into liquidlike droplets within cells, we carry out Monte Carlo simulations of a polymer lattice model to study the relationship between charge patterning and phase separation. Polymer chains containing neutral, positively charged, and negatively charged monomers are placed on a cubic lattice. Only nearest-neighbor interactions between charges are considered. We determine the phase diagram for a systematically varied set of sequences. We observe homogeneous fluids, liquid condensation, cluster phases, filaments, and crystal states. Of the six sequences we study, three form crystals at low temperatures. The other three sequences, which have lower charge densities, instead collapse into gel-like networks or unconnected finite clusters. Longer neutral patches along the sequence sterically limit the size and shape of low-energy structures, which is analogous to the effect of charge or limited valence in attractive colloids. Only one sequence clearly exhibits liquid behavior; this sequence has a reduced tendency to individually fold and crystallize compared to others of similar charge density and draws parallels to real IDP behavior.
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| http://dx.doi.org/10.1103/PhysRevE.100.052404 | DOI Listing |
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