Inverse transformed encoding models - a solution to the problem of correlated trial-by-trial parameter estimates in fMRI decoding.

Neuroimage

Bernstein Center for Computational Neuroscience, Berlin, Germany; Berlin Center for Advanced Neuroimaging, Berlin, Germany; Berlin School of Mind and Brain, Berlin, Germany; Clinic for Neurology, Charité-Universitätsmedizin Berlin, Germany; Department of Psychology, Humboldt-Universität zu Berlin, Germany; EXC NeuroCure, Charité-Universitätsmedizin Berlin, Germany; EXC Science of Intelligence, Technische Universität Berlin, Germany; CRC Volition and Cognitive Control, Technische Universität Dresden, Germany.

Published: April 2020

Techniques of multivariate pattern analysis (MVPA) can be used to decode the discrete experimental condition or a continuous modulator variable from measured brain activity during a particular trial. In functional magnetic resonance imaging (fMRI), trial-wise response amplitudes are sometimes estimated from the measured signal using a general linear model (GLM) with one onset regressor for each trial. When using rapid event-related designs with trials closely spaced in time, those estimates are highly variable and serially correlated due to the temporally extended shape of the hemodynamic response function (HRF). Here, we describe inverse transformed encoding modelling (ITEM), a principled approach of accounting for those serial correlations and decoding from the resulting estimates, at low computational cost and with no loss in statistical power. We use simulated data to show that ITEM outperforms the current standard approach in terms of decoding accuracy and analyze empirical data to demonstrate that ITEM is capable of visual reconstruction from fMRI signals.

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http://dx.doi.org/10.1016/j.neuroimage.2019.116449DOI Listing

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