Water sources from the lower reaches of the Heihe River northwest China, located in an arid area impacted by environmental stresses, have promoted changes to the local soil and plant conditions; however, our understanding of variations and drivers of soil bacterial communities in an arid inland river basin remains unclear. Therefore, we collected 39 soil samples from a riparian oasis zone (ROZ) to the circumjacent desert zone (CDZ) at the lower reaches of Heihe River to evaluate bacterial communities based on the 16S rRNA gene data. We found that the bacterial community composition differed between ROZ and CDZ habitats, with significantly higher relative abundance of the phyla Gemmatimonadetes and Acidobacteria in ROZ, whereas the abundance of the phyla Actinobacteria and Deinococcus-Thermus was greater in CDZ. The difference in the bacterial community was almost entirely generated by the species turnover rather than the nestedness among all samples. In addition, we found that bacterial α-diversity index showed no significant difference between ROZ and CDZ habitats. The distance-decay analysis showed that spatial distance, plant community, soil property, and plant functional trait were correlated with bacterial community variations. However, the variation partition analysis (VPA) revealed that both soil properties and plant community strongly explained the difference [such as soil water content (WC), soil silt content, and plant community structure] compared with plant functional traits in bacterial β-diversity and species turnover. Based on a co-occurrence network analysis, we found that the bacterial network of ROZ, which had more negative correlations, higher average connectivity, shorter average path length, and smaller modularity, was more complex than the network of CDZ. This suggested that the bacterial community was more stable and less vulnerable to change in the ROZ habitat than in the CDZ habitat. Overall, our findings suggest that the heterogeneity of soil properties and plant community collectively affect the structure of the soil bacterial community in an arid inland river basin. However, the influence of plant functional traits on the variation of the bacterial community depends on soil properties and plant community.
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http://dx.doi.org/10.3389/fmicb.2019.02655 | DOI Listing |
mBio
January 2025
Department of Integrative Biology, University of California, Berkeley, Berkeley, California, USA.
The composition of the gut microbiome is determined by a complex interplay of diet, host genetics, microbe-microbe interactions, abiotic factors, and stochasticity. Previous studies have demonstrated the importance of host genetics in community assembly of the gut microbiome and identified a central role for DBL-1/BMP immune signaling in determining the abundance of gut . However, the effects of DBL-1 signaling on gut bacteria were found to depend on its activation in extra-intestinal tissues, highlighting a gap in our understanding of the proximal factors that determine microbiome composition.
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January 2025
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China.
Sexual reproduction and recruitment enhance the genetic diversity and evolution of reef-building corals for population recovery and coral reef conservation under climate change. However, new recruits are vulnerable to physical changes and the mechanisms of symbiosis establishment remain poorly understood. Here, , a broadcast spawning hermaphrodite reef-building coral, was subjected to settlement and juvenile growth in flow-through seawater at 27.
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January 2025
Stockbridge School of Agriculture, University of Massachusetts, Amherst, Massachusetts 01003, United States.
Concern over nanoplastic contamination of wetland ecosystems has been increasing. However, little is known about the effect of photoaging on the distribution and biological response of the nanoplastics. Here, palladium-labeled polystyrene nanoplastics (PS-Pd NPs) at 0.
View Article and Find Full Text PDFFront Microbiol
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Yingshan Fucheng Meat Pigeon Breeding Professional Cooperative, Nanchong, China.
Background: Pigeons are significant economic animals in China; however, research regarding the establishment and influencing factors of gut microbiota in squabs remains limited. Understanding how the gut microbiota develops in pigeons, particularly in relation to pigeon milk, is importance in pigeon production. This study aims to elucidate the establishment characteristics of the gut microbiota in White King pigeon squabs and explore the role of pigeon milk in this process.
View Article and Find Full Text PDFAnalyst
January 2025
College of Food Science and Technology, Shanghai Ocean University (SHOU), 999 Hucheng Ring Road, Pudong New District, 201306 Shanghai, China.
The expansion of the seafood market has led to an increased probability of food fraud. The development of rapid and reliable traceability methods for aquatic food products is of utmost importance. In this study, direct analysis and identification of the intestinal microbiota of aquatic foods were conducted.
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