Epimerization of an Ascaroside-Type Glycolipid Downstream of the Canonical β-Oxidation Cycle in the Nematode .

Org Lett

Laboratory for Bioanalytical Chemistry, Institute of Chemistry , University of Neuchâtel, Avenue de Bellevaux 51 , CH-2000 Neuchâtel , Switzerland.

Published: December 2019

A species-specific ascaroside-type glycolipid was identified in the nematode using HPLC-ESI-(-)-MS/MS precursor ion scanning, HR-MS/MS, and NMR techniques. Its structure containing an l-3,6-dideoxy--hexose unit was established by total synthesis. The identification of this novel 4--ascaroside (caenorhabdoside) in along with the previous identification of 2--ascarosides (paratosides) in indicate that nematodes can generate highly specific signaling molecules by epimerization of the ascarylose building block downstream of the canonical β-oxidation cycle.

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http://dx.doi.org/10.1021/acs.orglett.9b03808DOI Listing

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Epimerization of an Ascaroside-Type Glycolipid Downstream of the Canonical β-Oxidation Cycle in the Nematode .

Org Lett

December 2019

Laboratory for Bioanalytical Chemistry, Institute of Chemistry , University of Neuchâtel, Avenue de Bellevaux 51 , CH-2000 Neuchâtel , Switzerland.

A species-specific ascaroside-type glycolipid was identified in the nematode using HPLC-ESI-(-)-MS/MS precursor ion scanning, HR-MS/MS, and NMR techniques. Its structure containing an l-3,6-dideoxy--hexose unit was established by total synthesis. The identification of this novel 4--ascaroside (caenorhabdoside) in along with the previous identification of 2--ascarosides (paratosides) in indicate that nematodes can generate highly specific signaling molecules by epimerization of the ascarylose building block downstream of the canonical β-oxidation cycle.

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