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Edaphic specialization is one of the main drivers of plant diversification and has multifaceted effects on population dynamics. Carex angustisquama is a sedge plant growing only on heavily acidified soil in solfatara fields, where only extremophytes can survive. Because of the lack of closely related species in similar habitats and its disjunct distribution, the species offers ideal settings to investigate the effects of adaptation to solfatara fields and of historical biogeography on the genetic consequences of plant edaphic specialization to solfatara fields. Here, genome-wide single nucleotide polymorphisms were used to reveal the phylogenetic origin of C. angustisquama, and 16 expressed sequence tag-simple sequence repeat markers were employed to infer population demography of C angustisquama. Molecular phylogenetic analysis strongly indicated that C. angustisquama formed a monophyletic clade with Carex doenitzii, a species growing on nonacidified soil in the sympatric subalpine zone. The result of population genetic analysis showed that C. angustisquama has much lower genetic diversity than the sister species, and notably, all 16 loci were completely homozygous in most individuals of C. angustisquama. Approximate Bayesian computation analysis supported the model that assumed hierarchical declines of population size through its evolutionary sequence. We propose that the edaphic specialist in solfatara fields has newly attained the adaptation to solfatara fields in the process of speciation. Furthermore, we found evidence of a drastic reduction in genetic diversity in C. angustisquama, suggesting that the repeated founder effects associated with edaphic specialization and subsequent population demography lead to the loss of genetic diversity of this extremophyte in solfatara fields.
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http://dx.doi.org/10.1111/mec.15324 | DOI Listing |
J Plant Res
November 2024
Graduate School of Integrated Sciences for Life, Hiroshima University, Kagamiyama 1-7-1, Higashi, Hiroshima, 7398521, Japan.
Plant Cell Physiol
October 2024
Graduate School of Human and Environmental Studies, Kyoto University, Yoshida-nihonmatsu-cho, Sakyo-ku, Kyoto 6068501, JAPAN.
Sci Total Environ
December 2024
Karen M. Swindler Department of Chemical and Biological Engineering, South Dakota School of Mines and Technology, Rapid City, 57701, SD, United States; Data-Driven Material Discovery Center for Bioengineering Innovation, South Dakota School of Mines and Technology, Rapid City, SD, United States; Dimensional Materials for Biofilm Engineering, Science and Technology, South Dakota School of Mines and Technology, Rapid City, SD, United States; BuGReMeDEE Consortium, South Dakota School of Mines and Technology, Rapid City, SD, United States.
Acidophiles are a group of organisms typically found in highly acidic environments such as acid mine drainage. These organisms have several physiological features that enable them to thrive in highly acidic environments (pH ≤3). Considering that both acid mine drainage and solfatara fields exhibit extreme and dynamic ecological conditions for acidophiles, it is crucial to gain deeper insights into the adaptive mechanisms employed by these unique organisms.
View Article and Find Full Text PDFPlant Biol (Stuttg)
June 2023
Graduate School of Human and Environmental Studies, Kyoto University, Kyoto, Japan.
Volcanic acidification creates extreme soil conditions, where rhizotoxicity from extremely low pH (2-3) and high Al strongly inhibit plant growth. C. angustisquama is a dominant extremophyte in highly acidic solfatara fields, where no other vascular plants can survive.
View Article and Find Full Text PDFSci Rep
February 2022
Istituto Nazionale di Geofisica e Vulcanologia, Sezione di Bologna, Via Donato Creti, 12, 40128, Bologna, Italy.
One of the most effective approaches to identifying possible precursors of eruptions is the analysis of seismicity patterns recorded at volcanoes. Accurate locations of the seismicity and the estimate of source mechanisms can resolve fault systems and track fluid migrations through volcanoes. We analysed the six main swarms recorded at Campi Flegrei since 2000, using them as a proxy of the processes involved in the long-term-unrest of this densely populated caldera.
View Article and Find Full Text PDFEnter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!