Next-Generation Sequencing on Insectivorous Bat Guano: An Accurate Tool to Identify Arthropod Viruses of Potential Agricultural Concern.

Viruses

Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle- Unité Mixe de Recherche 224 (MIVEGEC), Institut de Recherche pour le Développement (IRD), Centre National de Recherche Scientifique (CNRS), Univ. Montpellier, 34398 Montpellier, France.

Published: November 2019

Viruses belonging to the family have attracted a great deal of attention from scientists owing to their negative impact on agricultural economics, as well as their recent identification as potential aetiological agents of febrile illness in human patients. On the other hand, some Dicistroviruses are also studied for their potential biopesticide properties. To date, Dicistrovirus characterized in African mainland remain scarce. By using High-Throughput Sequencing technology on insectivorous bat faeces () sampled in a cave used by humans to collect bat guano (bat manure) as fertilizer in Zimbabwe, we characterized the full-length sequences of three belonging to the and genus: (-Like), (), and (). Phylogenetic analyses of ORF-1 and ORF-2 genes showed a complex evolutionary history between and close viruses, as well as for the genus. Herewith, we provide the first evidence of the presence of in Zimbabwe and highlight the need to further document the impact of such viruses on crops, as well as in beekeeping activities in Zimbabwe which represent a crucial source of income for Zimbabwean people.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6950063PMC
http://dx.doi.org/10.3390/v11121102DOI Listing

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