Signal propagation over long distances is a ubiquitous feature of multicellular communities, but cell-to-cell variability can cause propagation to be highly heterogeneous. Simple models of signal propagation in heterogenous media, such as percolation theory, can potentially provide a quantitative understanding of these processes, but it is unclear whether these simple models properly capture the complexities of multicellular systems. We recently discovered that in biofilms of the bacterium Bacillus subtilis, the propagation of an electrical signal is statistically consistent with percolation theory, and yet it is reasonable to suspect that key features of this system go beyond the simple assumptions of basic percolation theory. Indeed, we find here that the probability for a cell to signal is not independent from other cells as assumed in percolation theory, but instead is correlated with its nearby neighbors. We develop a mechanistic model, in which correlated signaling emerges from cell division, phenotypic inheritance, and cell displacement, that reproduces the experimentally observed correlations. We find that the correlations do not significantly affect the spatial statistics, which we rationalize using a renormalization argument. Moreover, the fraction of signaling cells is not constant in space, as assumed in percolation theory, but instead varies within and across biofilms. We find that this feature lowers the fraction of signaling cells at which one observes the characteristic power-law statistics of cluster sizes, consistent with our experimental results. We validate the model using a mutant biofilm whose signaling probability decays along the propagation direction. Our results reveal key statistical features of a correlated signaling process in a multicellular community. More broadly, our results identify extensions to percolation theory that do or do not alter its predictions and may be more appropriate for biological systems.
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http://dx.doi.org/10.1371/journal.pcbi.1007508 | DOI Listing |
Nanoscale
December 2024
Layered Materials and Device Physics Laboratory, Department of Chemistry, Physics and Atmospheric Science, Jackson State University, Jackson, MS 39217, USA.
The metal-to-insulator phase transition (MIT) in two-dimensional (2D) materials under the influence of a gating electric field has revealed interesting electronic behavior and the need for a deeper fundamental understanding of electron transport processes, while attracting much interest in the development of next-generation electronic and optoelectronic devices. Although the mechanism of the MIT in 2D semiconductors is a topic under debate in condensed matter physics, our work demonstrates the tunable percolative phase transition in few-layered MoSe field-effect transistors (FETs) using different metallic contact materials. Here, we attempted to understand the MIT through temperature-dependent electronic transport measurements by tuning the carrier density in a MoSe channel under the influence of an applied gate voltage.
View Article and Find Full Text PDFAngew Chem Int Ed Engl
December 2024
University of Michigan, COMPASS, UNITED STATES OF AMERICA.
Self-replication of molecules and microdroplets have been explored as models in prebiotic chemistry. An analogous process for inorganic nanomaterials would involve the autocatalytic nucleation of nanoparticles-an area that remains largely uncharted. Demonstrating such systems would be both fundamentally intriguing and practically relevant, especially if the resulting particles self-assemble.
View Article and Find Full Text PDFPLoS One
December 2024
Biologic Institute, Redmond, WA, United States of America.
A key question in protein evolution and protein engineering is the prevalence of evolutionary paths between distinct proteins. An evolutionary path corresponds to a continuous path of functional sequences in sequence space leading from one protein to another. Natural selection could direct a mutating coding region in DNA along a continuous functional path (CFP), so a new protein could arise far more easily than if a coding region were randomly mutating without any constraints.
View Article and Find Full Text PDFPolymers (Basel)
November 2024
Centre of Polymer and Carbon Materials, Polish Academy of Sciences, ul. M. Curie-Skłodowskiej 34, 41-819 Zabrze, Poland.
One of the key parameters characterizing the microstructure of a layer is its degree of order. It can be determined from optical studies or X-ray diffraction. However, both of these methods applied to the same layer may give different results because, for example, aggregates may contribute to the amorphous background in XRD studies, while in optical studies, they may already show order.
View Article and Find Full Text PDFNat Commun
November 2024
Department of Materials Science and Engineering, Graduate School of Engineering, Tohoku University, Sendai, Japan.
Like the crystallization of water to ice, magnetic transition occurs at a critical temperature after the slowing down of dynamically fluctuating short-range correlated spins. Here, we report a unique type of magnetic transition characterized by a linear increase in the volume fraction of unconventional static short-range-ordered spin clusters, which triggered a transition into a long-range order at a threshold fraction perfectly matching the bond percolation theory in a new quantum antiferromagnet of pseudo-trigonal Cu(OH)Cl. Static short-range order appeared in its Kagome lattice plane below ca.
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