A novel actinobacterium producing biosurfactant, designated OTB305, was isolated from marine sediment sampled at Otsuchi Bay, Iwate Prefecture, Japan and its taxonomic position was examined using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences exhibited that strain OTB305 was closely related to JCM 19630 (98.8 %) and DSM 42084 (98.8 %). The chemotaxonomic characteristics of strain OTB305 corresponded to those of the genus as follows: the diamino acid of the cell-wall peptidoglycan was ll-diaminopimelic acid; whole-cell hydrolysates contained glucose and lacked characteristic major sugars; the predominant isoprenoid quinones were MK-9(H) and MK-9(H); the polar lipids were phosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol and an unidentified phospholipid; the major cellular fatty acids were iso-C, C and C 7; and the genomic DNA G+C content was 72.83 mol%. However, genomic relatedness analysis based on the average nucleotide identity and some phenotypic characteristics revealed that strain OTB305 was distinguished from closely related species. Therefore, strain OTB305 represents a novel species of the genus , for which the name sp. nov. is proposed. The type strain is OTB305 (=NBRC 113255=TBRC 9682).
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http://dx.doi.org/10.1099/ijsem.0.003638 | DOI Listing |
Arch Microbiol
November 2022
Department of Biology, Southern Oregon University, Ashland, OR, USA.
Strain 5675061 was isolated from a deep-sea microbial mat near hydrothermal vents within the Axial Seamount caldera on the Juan de Fuca Ridge (NE Pacific Ocean) and was taxonomically evaluated using a polyphasic approach. Morphological and chemotaxonomic properties are consistent with characteristics of the genus Streptomyces: aerobic Gram-stain-positive filaments that form spores, L,L-diaminopimelic acid in whole-cell hydrolysates, and iso-C as the major fatty acid. Phylogenetic analysis, genomic, and biochemical comparisons show close evolutionary relatedness to Streptomyces lonarensis NCL716, S.
View Article and Find Full Text PDFInt J Syst Evol Microbiol
December 2019
Biological Resource Center, National Institute of Technology and Evaluation (NBRC), 2-5-8 Kazusakamatari, Kisarazu, Chiba 292-0818, Japan.
A novel actinobacterium producing biosurfactant, designated OTB305, was isolated from marine sediment sampled at Otsuchi Bay, Iwate Prefecture, Japan and its taxonomic position was examined using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences exhibited that strain OTB305 was closely related to JCM 19630 (98.8 %) and DSM 42084 (98.
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