A PHP Error was encountered

Severity: Warning

Message: file_get_contents(https://...@pubfacts.com&api_key=b8daa3ad693db53b1410957c26c9a51b4908&a=1): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests

Filename: helpers/my_audit_helper.php

Line Number: 176

Backtrace:

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 176
Function: file_get_contents

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 250
Function: simplexml_load_file_from_url

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 1034
Function: getPubMedXML

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3152
Function: GetPubMedArticleOutput_2016

File: /var/www/html/application/controllers/Detail.php
Line: 575
Function: pubMedSearch_Global

File: /var/www/html/application/controllers/Detail.php
Line: 489
Function: pubMedGetRelatedKeyword

File: /var/www/html/index.php
Line: 316
Function: require_once

Simulation of fluid/gel phase equilibrium in lipid vesicles. | LitMetric

Simulation of fluid/gel phase equilibrium in lipid vesicles.

Soft Matter

Boston University, Chemistry Department, 590 Commonwealth Avenue, Boston, MA 02215, USA.

Published: October 2019

Simulation of single component dipalmitoylphosphatidylcholine (DPPC) coarse-grained DRY-MARTINI lipid vesicles of diameter 10 nm (1350 lipids), 20 nm (5100 lipids) and 40 nm (17 600 lipids) is performed using statistical temperature molecular dynamics (STMD), to study finite size effects upon the order-disorder gel/fluid transition. STMD obtains enhanced sampling using a generalized ensemble, obtaining a flat energy distribution between upper and lower cutoffs, with little computational cost over canonical molecular dynamics. A single STMD trajectory of moderate length is sufficient to sample 20+ transition events, without trapping in the gel phase, and obtain well averaged properties. Phase transitions are analyzed via the energy-dependence of the statistical temperature, T(U). The transition temperature decreases with decreasing diameter, in agreement with experiment, and the transition changes from first order to borderline first-second order. The size- and layer-dependence of the structure of both stable phases, and of the pathway of the phase transition, are determined. It is argued that the finite size effects are primarily caused by the disruption of the gel packing by curvature. Inhomogeneous states with faceted gel patches connected by unusual fluid seams are observed at high curvature, with visually different structure in the inner and outer layers due to the different curvatures. Thus a simple physical picture describes phase transitions in nanoscale finite systems far from the thermodynamic limit.

Download full-text PDF

Source
http://dx.doi.org/10.1039/c9sm00854cDOI Listing

Publication Analysis

Top Keywords

lipid vesicles
8
statistical temperature
8
molecular dynamics
8
finite size
8
size effects
8
phase transitions
8
phase
5
transition
5
simulation fluid/gel
4
fluid/gel phase
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!