Influence of DFT Functionals and Solvation Models on the Prediction of Far-Infrared Spectra of Pt-Based Anticancer Drugs: Why Do Different Complexes Require Different Levels of Theory?

ACS Omega

Monash Computational Chemistry Group, School of Chemistry and Centre for Biospectroscopy, School of Chemistry, Monash University, 17 Rainforest Walk, Clayton, Victoria 3800, Australia.

Published: March 2019

Computational modeling was applied to far-infrared (FIR) spectra of Pt-based anticancer drugs to study the hydrolysis of these important molecules. Here, we present a study that investigates the influence of different factors-basis sets on non-Pt atoms, relativistic effective core potentials (RECPs) on the Pt atom, density functional theory (DFT) functionals, and solvation models-on the prediction of FIR spectra of two Pt-based anticancer drugs, cisplatin and carboplatin. Geometry optimizations and frequency calculations were performed with a range of functionals (PBE, PBE0, M06-L, and M06-2X), Dunning's correlation-consisted basis sets (VDZ, VTZ, aVDZ, and aVTZ), RECPs (VDZ-pp, VTZ-pp, aVDZ-pp, and aVTZ-pp), and solvation models (IEFPCM, CPCM, and SMD). The best combination of the basis set/DFT functional/solvation model was identified for each anticancer drug by comparing with experimentally available FIR spectra. Different combinations were established for cisplatin and carboplatin, which was rationalized by means of the partial atomic charge scheme, ChelpG, that was utilized to study the charge transfer between the Pt ion and ligands in both cisplatin and carboplatin.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6649127PMC
http://dx.doi.org/10.1021/acsomega.8b03455DOI Listing

Publication Analysis

Top Keywords

spectra pt-based
12
pt-based anticancer
12
anticancer drugs
12
fir spectra
12
cisplatin carboplatin
12
dft functionals
8
functionals solvation
8
solvation models
8
influence dft
4
models prediction
4

Similar Publications

Theoretical investigation of structure and electronic properties in Cisplatin-citrate complexes.

J Comput Chem

January 2025

Center of Excellence in Biocatalyst and Sustainable Biotechnology, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok, Thailand.

Cisplatin (CDDP) is an effective Platinum (Pt) based anticancer drug used in chemotherapy. However, its effectiveness is limited due to its instability in solvents, along with the side effects it causes due to DNA damage. Nanoparticles (NPs) were developed in vitro to address these issues by loading CDDP into various types of NPs, including metal, lipid, and biological NPs.

View Article and Find Full Text PDF

Nanosecond pulsed laser irradiation is employed for synthesis of highly active and stable Pt-based electrocatalysts by anchoring Pt nanoclusters on porous sulfur-doped carbon supports (L-Pt/SC). Strong metal-support interaction (SMSI) between Pt and S induces a local charge rearrangement and modulates the electronic structure of Pt surroundings, thus boosting the reaction kinetics and enhancing stability in long-term hydrogen evolution reaction (HER). The L-Pt/SC catalyst exhibits high activity toward HER, with an overpotential of 23 mV at current densities reaching 10 mA cm and a Tafel slope of 24 mV dec.

View Article and Find Full Text PDF

Interface-rich porous Fe-doped hcp-PtBi/fcc-Pt heterostructured nanoplates enhanced the CC bond cleavage of C3 alcohols electrooxidation.

J Colloid Interface Sci

January 2025

Center for R&D of Fine Chemicals, State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, College of Chemistry and Chemical Engineering, Guizhou University, Guiyang, Guizhou Province 550025, People's Republic of China. Electronic address:

Article Synopsis
  • Researchers developed porous Fe-doped PtBi/Pt nanoplates that enhance renewable energy efficiency by effectively catalyzing glycerol oxidation in direct fuel cells.
  • The new electrocatalyst shows a mass activity for glycerol oxidation that's 4.75 times higher than commercial Pt black and achieves better power density in fuel cells.
  • These nanoplates also effectively oxidize various alcohols, revealing insights into the catalytic activity and bond cleavage processes involved in renewable energy applications.
View Article and Find Full Text PDF

A temperature-adjustable infrared diffuse reflectance spectroscopy system for catalysts.

Chem Commun (Camb)

April 2024

College of Chemistry and Chemical Engineering, Inner Mongolia Engineering and Technology Research Center for Catalytic Conversion and Utilization of Carbon Resource Molecules, Inner Mongolia University, Hohhot 558000, China.

We introduce an innovative infrared diffuse reflection rapid detection system, endowed with a temperature regulation function. This system is adept at conducting rapid infrared spectra scanning as well as simulating the catalytic environment of diverse reaction systems. The infrared absorption spectra of four kinds of Pt-based catalysts under vacuum conditions across a wide temperature spectrum ranging from -180 to 300 °C are obtained and analysed through IR correlation spectroscopy.

View Article and Find Full Text PDF

Metallenes, intermetallic compounds, and porous nanocrystals are the three types of most promising advanced nanomaterials for practical fuel cell devices, but how to integrate the three structural features into a single nanocrystal remains a huge challenge. Herein, we report an efficient one-step method to construct freestanding mesoporous Mo-doped PtBi intermetallic metallene superstructures (denoted M-PtBiMo IMSs) as highly active and stable ethylene glycol oxidation reaction (EGOR) catalysts. The materials retained their catalytic performance, even in complex direct ethylene glycol fuel cells (DEGFCs).

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!